Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0095K03_T7_28517

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0095K03_T7_28517
Primer
T7
ID from Seq. Facility
LE_HBa_095_K03-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
737 trimmed for vector and quality, 905 raw
Sequence
>LE_HBa0095K03_T7_28517 (raw untrimmed)
AATCGGGTCCCGGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGTTGATGCTGATGGCTTAAGGATCGGTCCTATTAATGCCAAATTTCTAA
AGAGATACTATCCTTGAAGGAAGATGATGCTCCTTAAGGTACGAGCCTAAGCTGCATGTCACTCCTGGCCCGCAAGAGTATAAACTGTGTACGGCACAAC
CACAAAAAAAGAATCACTCAAATCCCCAGAACTACGTTGTGACTTGATCCTCTTTATTGAGGTACGTAGGCGCTTAGAACCATATTCTAAGTTCAGTTGC
ATGAGTGTCAAAAAAAATGTTCCCACTTGATCTATTGCATGAAAGTCAAAGCGATATGTATTTTATTTTTATCTTTTGTCTCATCAAACTTAAGACTTGC
ACGAAGTATTGATGGGTTTATGAAAGGGGCAAACCCTTATAAAATATGAATCTCTTATTAGTACGGTGGAAGTCTTTAAATTAGATCAAGTATGCAAATT
GGAGTCTTTATATTCTTCGAGTTTATTATTTGAAGTAGCCAAATTCTCTAAGTATACAGGTTAAAGTATCCAAATACTCTAAGTATGAAGGTAAGACTTC
AAGTATATAAGTAGAAGTCTCCAAATGCGTATGTAATTGAATTTCATGCCCAAAGGTGCGCGAGGTTTGTCCCTTTGCACCTTAAGCTAGCTTTGTTGCA
GATTATCCCCTCATATATCTTTGAATTTCTATGTTTTTAGGTGGACAGATTTGTTCCTTTGCTCTTTAAACTAGGCCTTTTCCCGGGAGTATACTTAGAA
CAATCTTTTTAAATATTCAGGTCCAAGGGGGATAAATATCGTCCTTTCCCCCTTACTTTACCTTTCACTGGCGTTTTCAATACATTCTTCAATCCTCCGC
CCTAC
>LE_HBa0095K03_T7_28517 (trimmed for quality and cloning vector)
AGCTTGTTGATGCTGATGGCTTAAGGATCGGTCCTATTAATGCCAAATTTCTAAAGAGATACTATCCTTGAAGGAAGATGATGCTCCTTAAGGTACGAGC
CTAAGCTGCATGTCACTCCTGGCCCGCAAGAGTATAAACTGTGTACGGCACAACCACAAAAAAAGAATCACTCAAATCCCCAGAACTACGTTGTGACTTG
ATCCTCTTTATTGAGGTACGTAGGCGCTTAGAACCATATTCTAAGTTCAGTTGCATGAGTGTCAAAAAAAATGTTCCCACTTGATCTATTGCATGAAAGT
CAAAGCGATATGTATTTTATTTTTATCTTTTGTCTCATCAAACTTAAGACTTGCACGAAGTATTGATGGGTTTATGAAAGGGGCAAACCCTTATAAAATA
TGAATCTCTTATTAGTACGGTGGAAGTCTTTAAATTAGATCAAGTATGCAAATTGGAGTCTTTATATTCTTCGAGTTTATTATTTGAAGTAGCCAAATTC
TCTAAGTATACAGGTTAAAGTATCCAAATACTCTAAGTATGAAGGTAAGACTTCAAGTATATAAGTAGAAGTCTCCAAATGCGTATGTAATTGAATTTCA
TGCCCAAAGGTGCGCGAGGTTTGTCCCTTTGCACCTTAAGCTAGCTTTGTTGCAGATTATCCCCTCATATATCTTTGAATTTCTATGTTTTTAGGTGGAC
AGATTTGTTCCTTTGCTCTTTAAACTAGGCCTTTTCC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.968217
Expected error %
1.44163
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0095K03
Clone
Clone name
hba-95k3
LE_HBa0095K03
P095K03
Clone type
BAC
Contamination
none
Estimated length
135,950
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found