Clone Read LE_HBa0095C07_T7_28141

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0095C07_T7_28141
Primer
T7
ID from Seq. Facility
LE_HBa_095_C07-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
668 trimmed for vector and quality, 950 raw
Sequence
>LE_HBa0095C07_T7_28141 (raw untrimmed)
CGGTGGGTCCCGGGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCAAAATATGTGTGGAGATTGAGACAGGAAGGGACATTAAGAACCTTCTGA
TATATCAAGAAGGAGAATAATTATCTAAGGTATTTGATGAATTTTGTGAGACTCGTGACATTTTAAAAGAGCTTAGAACAACATATACACCACAGCAAAA
TGGTGTGACCGAGAGGAAGAATAGAACCATTCTAAACATGGTTCCTATCTTGCTGGCTCAGGAAAGAGTTCCGTAGGAATTTATGCCAGAACGGTAAAAT
GGAGCATTCTTATCTTGAACAGAAGTTCAACTTTTTCTCTTCGAGATGTAATACCCGAGAAAGTGTGGAGCGGAAGTAAACCGGCAGTAGACCACCACAA
AAATTTTTTGATCCATTGCTTATGCACATATTCCAAAAGAAAAAAGAAAGAAGCTTAATGATAGAGATGATAAATGTGTTTTTCTTGGTGTTAGTGAAAC
ATGGTGTTCTAGAATTTGATGTAAAAATGAGGTTGCAGCAGTAGTACGTGTGCATATTCCACCCTCGAGATATGGTGTGTTGACTCAGGTAAAGGATGAG
CTATCCTATGTAACTGTTTACAACCATTGCGGGGATGTTTTTTTGTTTGATATGTACGGAGGAATGGACATGAGTATGAATCGTACTGTGTGAGGAAATC
TTGGACCCAAAAAGTCTCTAACAAACTTGGAACAATATTTCTTTGTTGCGCATGGTATTGTGTTGTGCCACCTCTTACCCCGTATCAACGGGGGGTGATG
ACTGCGCGGACACCTACAAACTTGACTGCTTCTCTTTTATTTCCCTAACGGGCGAAGAGAGAGTCTATTTGTGGACGTCCTACTTTCTGCCTCCTCTCGG
CATCTTTCCCTCCACGCCCGACTACCTCGCCCCGCGAACATCTCACCGTN
>LE_HBa0095C07_T7_28141 (trimmed for quality and cloning vector)
AGCTTCAAAATATGTGTGGAGATTGAGACAGGAAGGGACATTAAGAACCTTCTGATATATCAAGAAGGAGAATAATTATCTAAGGTATTTGATGAATTTT
GTGAGACTCGTGACATTTTAAAAGAGCTTAGAACAACATATACACCACAGCAAAATGGTGTGACCGAGAGGAAGAATAGAACCATTCTAAACATGGTTCC
TATCTTGCTGGCTCAGGAAAGAGTTCCGTAGGAATTTATGCCAGAACGGTAAAATGGAGCATTCTTATCTTGAACAGAAGTTCAACTTTTTCTCTTCGAG
ATGTAATACCCGAGAAAGTGTGGAGCGGAAGTAAACCGGCAGTAGACCACCACAAAAATTTTTTGATCCATTGCTTATGCACATATTCCAAAAGAAAAAA
GAAAGAAGCTTAATGATAGAGATGATAAATGTGTTTTTCTTGGTGTTAGTGAAACATGGTGTTCTAGAATTTGATGTAAAAATGAGGTTGCAGCAGTAGT
ACGTGTGCATATTCCACCCTCGAGATATGGTGTGTTGACTCAGGTAAAGGATGAGCTATCCTATGTAACTGTTTACAACCATTGCGGGGATGTTTTTTTG
TTTGATATGTACGGAGGAATGGACATGAGTATGAATCGTACTGTGTGAGGAAATCTTGGACCCAAAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.964897
Expected error %
0.545715
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
emb|CAB75932.1| Score 96 E Value 8e-19 Identity 13.10% Align. Length 449bp (67.22%) Frame 2
putative protein [Arabidopsis thaliana] pir||T47841 hypothetical protein T2O9.150 - Arabidopsis thaliana
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAG51247.1| Score 90 E Value 4e-17 Identity 12.40% Align. Length 449bp (67.22%) Frame 2
copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana] pir||E86451 probable copia-type polyprotein, 28768-32772 [imported] - Arabidopsis thaliana
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0095C07
Clone
Clone name
hba-95c7
LE_HBa0095C07
P095C07
Clone type
BAC
Contamination
none
Estimated length
104,182
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found