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Clone Read LE_HBa0196E03_SP6_278884

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0196E03_SP6_278884
Primer
SP6
ID from Seq. Facility
LE_HBa_196_E03-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
580 trimmed for vector and quality, 969 raw
Genbank Accession
DU095741
Sequence
>LE_HBa0196E03_SP6_278884 (raw untrimmed)
TTTTTAGCACTTTGCTACTGAAGCCATGTCCAAGAAGCACCAGGGCCAACACATTGTTCCCAAAGAAGATCAGTTGGGGTGAAAAATAATAATTTGTTTT
AAGGCTCAAATCATTTGGATCAATACGAGATTAACTTCATTTTTTTTAATTTCGAACAAATGCGTATGATCTTTCCTAATTGTTCATTCTGGATTACTTT
TAGCAAGACTAACCAGGCAAGTTCTAGCTTAGTCTCAATGGTGGATCCTTCGAATTTTCGTCAAACTCACTTGACATTCATTACATTCCCAGATTATTAG
ACACCTAGTTCGAGTCTTAGATTCAAGGTCATGCAGTAGTGTATCTCTATGTCATGGTTAGAGCCATACAATTATCAATTACTATGCCTAGTCATGCATC
ATTTTCATAGCAGGATATCATATTTGTTTTATCCATCATGCTTCAGAGTTATACTATGTACACAAGATATCACATGCCAGTTCAACAATAAAAGTAATAA
GTCTTTTGGGAAAAAAAGAACACAAGCAAGAAAACCCCAAAAGAGGATCGTAAATTAGGCTACTCAAACTTCACCCTAGCACTCACTTTCCATTTAACCC
ACCCCAACAAAAATATATGCAATTATCCCCAATGCCTAAAAAAAACTGAAATTCCAAGAGTGGCAGGTGAATCAAACTTGAGGTTGCAAAGTGGCCGGCG
ATCTTCAAGCTGGGTCGGTCCGGGTTCCCGGGAACCCACTACCCCCTGCAAGTCGGGAACCCCTCAATAAGTGTCCTCATCCGCCACCAACACTATTCAT
CCGTGCCCTTTCCTGGTCCCCCAACTTCCCCGGAAGCTGCAAGTGAACCCCCTCTGATCTATGGTCGACCTCCCGCTCTGGTGATTATAACCGACTTTCC
TGGGTTCTCTTCTCGGAATTAACTCCCGCCTGGTTTGATTTAGACACTCTATATATTTAAGACTCTTCG
>LE_HBa0196E03_SP6_278884 (trimmed for quality and cloning vector)
GCACCAGGGCCAACACATTGTTCCCAAAGAAGATCAGTTGGGGTGAAAAATAATAATTTGTTTTAAGGCTCAAATCATTTGGATCAATACGAGATTAACT
TCATTTTTTTTAATTTCGAACAAATGCGTATGATCTTTCCTAATTGTTCATTCTGGATTACTTTTAGCAAGACTAACCAGGCAAGTTCTAGCTTAGTCTC
AATGGTGGATCCTTCGAATTTTCGTCAAACTCACTTGACATTCATTACATTCCCAGATTATTAGACACCTAGTTCGAGTCTTAGATTCAAGGTCATGCAG
TAGTGTATCTCTATGTCATGGTTAGAGCCATACAATTATCAATTACTATGCCTAGTCATGCATCATTTTCATAGCAGGATATCATATTTGTTTTATCCAT
CATGCTTCAGAGTTATACTATGTACACAAGATATCACATGCCAGTTCAACAATAAAAGTAATAAGTCTTTTGGGAAAAAAAGAACACAAGCAAGAAAACC
CCAAAAGAGGATCGTAAATTAGGCTACTCAAACTTCACCCTAGCACTCACTTTCCATTTAACCCACCCCAACAAAAATAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.954832
Expected error %
0.426773
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0196E03
Clone
Clone name
hba-196e3
LE_HBa0196E03
P196E03
Clone type
BAC
Contamination
none
Estimated length
138,040
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found