Clone Read LE_HBa0183C03_SP6_277479

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0183C03_SP6_277479
Primer
SP6
ID from Seq. Facility
LE_HBa_183_C03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
594 trimmed for vector and quality, 957 raw
Sequence
>LE_HBa0183C03_SP6_277479 (raw untrimmed)
NNNNAAGAGCTATTACAAATAAGCATTTGTGAAGACTTTTGAAACTTGAGAACTTATCTTAACTTGACTCTTGAGTTTTCTTGACTTTCATTCTTAACTA
CTCTTGACTTGAATCTTAATTGATCCTTAAATTAGATTATGTATTCAAGGGTTATGATTTGTGTTTGGAAAGATCTCATGTTGTTTAGCAATATTTTTAG
ATAGATAAACATGACAAAAGACCGAAAACTAATATTCGAGAGTGATTCCGCGACGCAGAGAAGCATTTAAAATTTGGTTTCAAAAATGACTTTAGAGGAA
GAACACTCCATGTCAGCTCCACAACGTGAAGCAGAAATTTTCAAATCTTGGAGGTGGTAGCGCGACACGCTACAAATGTCAAATATCTCAATGAAATTTC
TTCTTTGTTCTTTAGCTCTTAACCCCCTAAACTCAATGGGTTATTTTTCCCAACACTGAGAATCGATCAAACCATCAACGTACATCAGATTTTACTCAAA
AATAGTAGTAAAAATGTGAATAAATCTCCAGCTATTTCAACAACACAACCCACAAGAATTCAAACGAATATCATCAAAAACTCGAGAAATTTACTTTCAA
ATCAAACATATTTTGCTGAATTCAGTCATTGGGCCCAGGGAGAAGTAGGTCATCACTATGTGATCTCACAAACCTTGTAGAGAACACCCTTGATGAATCC
CCCAGCTAATCCCGATAATCTGGACAGATCCTTGAAGTTCTTTTTCTTCCTCCAATTTTCCCCCCTCCTTTTCTCTTCTCAAAAAAACCGTAAACTTTTT
TTTCTCAAAGGTGAAAACCTACTAAAATTAATTTAGACCCCCAATTTTTCCCCTGAATTGAAATATAATAATTTGGGTCAGGGAAAGCCCTCACCCCCCC
TTTTAAAATTTGTGATTGGATATTTCCTTTTTTCAAACCCTGCCAAATTTCTTGAGG
>LE_HBa0183C03_SP6_277479 (trimmed for quality and cloning vector)
AGCATTTGTGAAGACTTTTGAAACTTGAGAACTTATCTTAACTTGACTCTTGAGTTTTCTTGACTTTCATTCTTAACTACTCTTGACTTGAATCTTAATT
GATCCTTAAATTAGATTATGTATTCAAGGGTTATGATTTGTGTTTGGAAAGATCTCATGTTGTTTAGCAATATTTTTAGATAGATAAACATGACAAAAGA
CCGAAAACTAATATTCGAGAGTGATTCCGCGACGCAGAGAAGCATTTAAAATTTGGTTTCAAAAATGACTTTAGAGGAAGAACACTCCATGTCAGCTCCA
CAACGTGAAGCAGAAATTTTCAAATCTTGGAGGTGGTAGCGCGACACGCTACAAATGTCAAATATCTCAATGAAATTTCTTCTTTGTTCTTTAGCTCTTA
ACCCCCTAAACTCAATGGGTTATTTTTCCCAACACTGAGAATCGATCAAACCATCAACGTACATCAGATTTTACTCAAAAATAGTAGTAAAAATGTGAAT
AAATCTCCAGCTATTTCAACAACACAACCCACAAGAATTCAAACGAATATCATCAAAAACTCGAGAAATTTACTTTCAAATCAAACATATTTTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.934219
Expected error %
0.280843
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0183C03
Clone
Clone name
hba-183c3
LE_HBa0183C03
C02HBa0183C03
P183C03
Clone type
BAC
Contamination
none
Estimated length
109,558
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found