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Clone Read LE_HBa0180I06_SP6_277264

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0180I06_SP6_277264
Primer
SP6
ID from Seq. Facility
LE_HBa_180_I06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
662 trimmed for vector and quality, 995 raw
Genbank Accession
Sequence
>LE_HBa0180I06_SP6_277264 (raw untrimmed)
NNNNGGATTACGATAAAGAGAATACTCACCTTGTCTCATCTCAACTCAACTCAAGAATACTCAACTTAACTCAAGAATGCTCAACTTAACTCAAGAATAC
TCAACTCAATGAAACGATAAAATATGCAATATGTATAAAGCTTTTACAACAGTAGATAATGACTCAAAATGTATATAAAAAGACAATAATAAACTCTTTA
CTCTTATTTGGGAGATTCTCTAACCAACAACTATCACTATGAGCTACATGATGATAAAACATCTCGTCCAAACTACCATAACTGTCATATACCTTGCCGA
TGTATAGAACATCCTCAACTAACTGGATTCACTTAGGTATTAATAAAAGGTATAATAAATCATCTAAAAAGTATGACTATTTACCCATGTTGACATACAT
GGTTTATGATGATTTTGAGTTGTCCAAACTCATCTCATATCGATGCTTAATACTACTCCCAATAATATATAACTCATGCTCATATATATAAAAACAAAAA
TCATCTTTAACTTGAGACTATTACGCAAAAGGTTCTCTTAAAAGAGATAATGCTCAAAAATTCCTCATTAACACAATAAAAAATTAAGGTTCTTCTCCCG
CTTTAAATGTAAAAGTGTTTACACTTGGGAATACTTAGTTCTCTTATATTCATTTTGAAACATGAAACTCATCTCTCCTCATTCTCATACTCAAGTACTC
GAGTCTTAAATTAAGTTTTAAAAAGATTGTAAAAAGATTTCTCCAGATGAACTCAAAAGAACTTTCTGGAACTTTCCCTCTTAACATTACTTTAATTTTG
AAATAGGTAAATTTTAAATAGTTGGATTAGGAAAAGCCATAATCTTTCTCAGAAATAAATGAAAAATTTTTAAGTTGGGGATTTCAAAGAAAAAAAAACT
TAGGTAGGGAATCTGAGGCAAAACTCACCTGTGGAAAAAAAGTGACCTAAAAGGTTAGAGGGGAACTTTGGGAAACCCCTGCCCCACGTTAAAGG
>LE_HBa0180I06_SP6_277264 (trimmed for quality and cloning vector)
ACTCACCTTGTCTCATCTCAACTCAACTCAAGAATACTCAACTTAACTCAAGAATGCTCAACTTAACTCAAGAATACTCAACTCAATGAAACGATAAAAT
ATGCAATATGTATAAAGCTTTTACAACAGTAGATAATGACTCAAAATGTATATAAAAAGACAATAATAAACTCTTTACTCTTATTTGGGAGATTCTCTAA
CCAACAACTATCACTATGAGCTACATGATGATAAAACATCTCGTCCAAACTACCATAACTGTCATATACCTTGCCGATGTATAGAACATCCTCAACTAAC
TGGATTCACTTAGGTATTAATAAAAGGTATAATAAATCATCTAAAAAGTATGACTATTTACCCATGTTGACATACATGGTTTATGATGATTTTGAGTTGT
CCAAACTCATCTCATATCGATGCTTAATACTACTCCCAATAATATATAACTCATGCTCATATATATAAAAACAAAAATCATCTTTAACTTGAGACTATTA
CGCAAAAGGTTCTCTTAAAAGAGATAATGCTCAAAAATTCCTCATTAACACAATAAAAAATTAAGGTTCTTCTCCCGCTTTAAATGTAAAAGTGTTTACA
CTTGGGAATACTTAGTTCTCTTATATTCATTTTGAAACATGAAACTCATCTCTCCTCATTCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.917729
Expected error %
0.105167
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0180I06
Clone
Clone name
hba-180i6
LE_HBa0180I06
P180I06
Clone type
BAC
Contamination
none
Estimated length
73,205
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found