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Clone Read LE_HBa0006I18_SP6_2722

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0006I18_SP6_2722
Primer
SP6
ID from Seq. Facility
LE_HBa_006_I18-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
769 trimmed for vector and quality, 1008 raw
Genbank Accession
DU022911
Sequence
>LE_HBa0006I18_SP6_2722 (raw untrimmed)
AAAAAAAAAAGGGAATNCAATCCCTATCTGCATAACCTCCCTCCTACACAATGCACAAAGTGGTGACTACATACTCATGTTTTACTTCATTTCTGTGTTT
TTCGCTCGGTCTCTAGAGTACGTATTGCAGTCTCTATTAATTTGGATTGCGCAATGCACAGCCTATTCAGGAGGAGGTGATGCTCTCAACAAGATTTTCT
TCATATCCATATTTAAATTCAAAACCTTTTAGTTAGTCTCGCTACCATGTTTTTACATAATCATTTTAGGAGTACAACAAGTTTTAATTTATTTATTTAT
TTTTGTAGTTTCTTATATATATAGTGACTGATAAAATCTTAATCTTATTAAATTACTCTATATTAAAAGTAATTTTTTAGCAGCAACTAATTAACAGTTT
TAGTGTTTTAATTATCGTTTAATATATTTTTCAGAGGCAATTAATATTTTTTTTAATAAATGTCTCTAAAATCTATAACGATATTGAATCTGATTACAAT
TAATTAACGCCGATAAAGTCTTTAATTTTTTTTTGAATGTGAATATTTATCTGTCACTAAAAGGTATTACTATAAATGTATGTTTAGTAGTTTTTTCAAT
GTTAACTTGTACACTGACATTGGTAGTAGTAGATGAAAGGGAAAAAGTGATTGGCAACCCTATTATCTTTTCATTATGCCTTTCTCTATACACAATTTAT
GCTCAATACACACTTTGCATATCCTTTTCTTGAGGAGATAAACTTTGGGATCAGCCCCTTTTTATCTTTATCCCAAGTAAAGAATTTTCCATCTGTCATT
GCAAATTCCACCAAAGGATTTCTACATTTCTTTGATTACTAAAAAAGCTAAGTAGTGGGACACTAGACAATGCATGAGTGCCTTTTGATATAAAAACCCC
CCCCCCACCCCCTTTTTTTTTGCCTTTTATAAACATTAGGTAAATTTTTTAAATTTTATTTAAAATTAAATTAATAAAAAAAATAAATTTTACAATATGC
AAATGTTC
>LE_HBa0006I18_SP6_2722 (trimmed for quality and cloning vector)
TCCCTCCTACACAATGCACAAAGTGGTGACTACATACTCATGTTTTACTTCATTTCTGTGTTTTTCGCTCGGTCTCTAGAGTACGTATTGCAGTCTCTAT
TAATTTGGATTGCGCAATGCACAGCCTATTCAGGAGGAGGTGATGCTCTCAACAAGATTTTCTTCATATCCATATTTAAATTCAAAACCTTTTAGTTAGT
CTCGCTACCATGTTTTTACATAATCATTTTAGGAGTACAACAAGTTTTAATTTATTTATTTATTTTTGTAGTTTCTTATATATATAGTGACTGATAAAAT
CTTAATCTTATTAAATTACTCTATATTAAAAGTAATTTTTTAGCAGCAACTAATTAACAGTTTTAGTGTTTTAATTATCGTTTAATATATTTTTCAGAGG
CAATTAATATTTTTTTTAATAAATGTCTCTAAAATCTATAACGATATTGAATCTGATTACAATTAATTAACGCCGATAAAGTCTTTAATTTTTTTTTGAA
TGTGAATATTTATCTGTCACTAAAAGGTATTACTATAAATGTATGTTTAGTAGTTTTTTCAATGTTAACTTGTACACTGACATTGGTAGTAGTAGATGAA
AGGGAAAAAGTGATTGGCAACCCTATTATCTTTTCATTATGCCTTTCTCTATACACAATTTATGCTCAATACACACTTTGCATATCCTTTTCTTGAGGAG
ATAAACTTTGGGATCAGCCCCTTTTTATCTTTATCCCAAGTAAAGAATTTTCCATCTGTCATTGCAAAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.920616
Expected error %
0.10801
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0006I18
Clone
Clone name
hba-6i18
LE_HBa0006I18
C08HBa0006I18
P006I18
Clone type
BAC
Contamination
none
Estimated length
120,815
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found