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Clone Read LE_HBa0107D15_SP6_266977

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0107D15_SP6_266977
Primer
SP6
ID from Seq. Facility
LE_HBa_107_D15-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
722 trimmed for vector and quality, 860 raw
Genbank Accession
DU084298
Sequence
>LE_HBa0107D15_SP6_266977 (raw untrimmed)
NTTTCCAGTTGCTTTTGCGACACATAATGATAGGCCACAAAACAATAGATATTCGAGATAAATAGGCCTCACTCAACAACAAGTTACAAAAAATAATGTT
TGCAACTCTATAGAGTTTTCTATAACGTGGTCATTGATTTTATTAAAGGAAAAAAGTACGAAAAATCATTAAAGTACTTAGTGAAGTACATGTATACAAA
CAATCTGCACTATAGGCTAGCACCAGTTTGGAACTTCTTCATTCTTTTTTTTCTCTCTACAGATTGTCCACCAGATGGAGCAGGAACAATTCNCGTCTGC
TTCTGTCTTTTTGTATTTTGCTTGCAGACCTGCTTCCTTCCCAGCTTTTGAGTGCCTCTGAAACCTTAATGGCATATCTTGTCGTGTAAATTGTCGTGTA
ACCTTGCCGCAATGTAGAAATAGATGATTAAATGTATCAATCTTTTCCCCACAAGAAACAACTGGAGCATAAAGTGATCCCTGTGTAAGGACTGCTTCCT
CAGCAAAAAGTCACAAAACAAGCTACTTTGTGTAGTATTTTATTTTTCTAAATGAGCATCCAAGGCCAATAGTAGAGTTGTTTATTGGAATGGTTCATCA
TTATGTAAGTTCCACTAACCTTGCAGGAACAGTTGTNACCGCTCAGCCACCATCAAGCGATCCTCTCCTCTCTAAAGCCCACCCAATTGTTCAATCGTGA
TAAAACAAAAAGTTGACCCACCGCTTTCCAATTGCCAAAGATAAGGCTCCTACCTTGAGTTGTCCACAATTCTACAATAGTTATTTCCAAACTTGCCAAT
TCATCCTTCCAGAAAAGAGTTTTTCCCCATTTAATACTTCAATCTTGGTATTGGGTTTTA
>LE_HBa0107D15_SP6_266977 (trimmed for quality and cloning vector)
ATAATGATAGGCCACAAAACAATAGATATTCGAGATAAATAGGCCTCACTCAACAACAAGTTACAAAAAATAATGTTTGCAACTCTATAGAGTTTTCTAT
AACGTGGTCATTGATTTTATTAAAGGAAAAAAGTACGAAAAATCATTAAAGTACTTAGTGAAGTACATGTATACAAACAATCTGCACTATAGGCTAGCAC
CAGTTTGGAACTTCTTCATTCTTTTTTTTCTCTCTACAGATTGTCCACCAGATGGAGCAGGAACAATTCNCGTCTGCTTCTGTCTTTTTGTATTTTGCTT
GCAGACCTGCTTCCTTCCCAGCTTTTGAGTGCCTCTGAAACCTTAATGGCATATCTTGTCGTGTAAATTGTCGTGTAACCTTGCCGCAATGTAGAAATAG
ATGATTAAATGTATCAATCTTTTCCCCACAAGAAACAACTGGAGCATAAAGTGATCCCTGTGTAAGGACTGCTTCCTCAGCAAAAAGTCACAAAACAAGC
TACTTTGTGTAGTATTTTATTTTTCTAAATGAGCATCCAAGGCCAATAGTAGAGTTGTTTATTGGAATGGTTCATCATTATGTAAGTTCCACTAACCTTG
CAGGAACAGTTGTNACCGCTCAGCCACCATCAAGCGATCCTCTCCTCTCTAAAGCCCACCCAATTGTTCAATCGTGATAAAACAAAAAGTTGACCCACCG
CTTTCCAATTGCCAAAGATAAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.96891
Expected error %
1.35453
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0107D15
Clone
Clone name
hba-107d15
LE_HBa0107D15
C09HBa0107D15
P107D15
Clone type
BAC
Contamination
none
Estimated length
132,154
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found