Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0187N20_SP6_266685

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0187N20_SP6_266685
Primer
SP6
ID from Seq. Facility
LE_HBa_187_N20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
672 trimmed for vector and quality, 970 raw
Sequence
>LE_HBa0187N20_SP6_266685 (raw untrimmed)
NCCATGGACTTGATCTCAGCTTGAACCCTAGAACTTGATTCTCCCCTTTCCAATTCGTTCTCCTTGTTCTTGGTCTACAAACAATCATAATAACATGTGA
ATCAATAAACAATTATTAATTATTCAAATTATTAACAATTCTATGAACCCTAGATCAAACTAATGATCCCAATCTCCTTATTAAGGCTTTTTTCATAATA
GATTCTAGATCAAAACCCTTCCCCATCGATAATTACCCATTAGACTACATTTTACATATTGAAAAACGGATTTAAGGAGTTAAAATCCTACCTCTAACCT
CAATAATGGTGGAAAACTATCAAGAAAATACCTGGGTTCGTTCCTTAGCTCTCAGATATGAAAATTGAATAATAAAACATATTTGGGGTTTGTTTACGCC
TTTAAATCGTGTCTGGCCCGCCCCAACGGTCCTTACACCACTATAGCGGCCCTTCCCTGGCGATAAAAATAACTGTTAATGTAGCTTGTGTGAAATAGTG
AGCCATTCAAACAAATCCAATGCCCCCATTTTACAACACACCTCCAATCAACGACACTCTAAAACTACACATTCACACTAAAATCGATTTTGGTTCCTCG
TCATATTGTCTTACCAGTCTCAAAATTCATGTCCCTTAACTTATCATTTGCATACTTCTTTTACCTACTCTGGGCTGCTAGAAGATTAGCTTGAATACTC
CTCACCTTATCTTGAGCTACCTTCATCAAATCAAACCCCCAAGGTTTCACATCTCCCGCTTTTAACATCCTATGGGTGATCTACATCATATCTCATAGAG
TGCCCAAAATGGTGTCATATCTATGCCCCTATTGATAACTTTTATTATAGGAGAAATTCCCCAAGGGTAGGAAATTCCTCCCATGGCCCTCCAAAATAAA
CCCACCCCCCCCCTCAAAGGTCTTTCTAAACTTGAAAAATCCCTCTCGGAATGCCCCCCCTGCCTGTCCA
>LE_HBa0187N20_SP6_266685 (trimmed for quality and cloning vector)
GAACTTGATTCTCCCCTTTCCAATTCGTTCTCCTTGTTCTTGGTCTACAAACAATCATAATAACATGTGAATCAATAAACAATTATTAATTATTCAAATT
ATTAACAATTCTATGAACCCTAGATCAAACTAATGATCCCAATCTCCTTATTAAGGCTTTTTTCATAATAGATTCTAGATCAAAACCCTTCCCCATCGAT
AATTACCCATTAGACTACATTTTACATATTGAAAAACGGATTTAAGGAGTTAAAATCCTACCTCTAACCTCAATAATGGTGGAAAACTATCAAGAAAATA
CCTGGGTTCGTTCCTTAGCTCTCAGATATGAAAATTGAATAATAAAACATATTTGGGGTTTGTTTACGCCTTTAAATCGTGTCTGGCCCGCCCCAACGGT
CCTTACACCACTATAGCGGCCCTTCCCTGGCGATAAAAATAACTGTTAATGTAGCTTGTGTGAAATAGTGAGCCATTCAAACAAATCCAATGCCCCCATT
TTACAACACACCTCCAATCAACGACACTCTAAAACTACACATTCACACTAAAATCGATTTTGGTTCCTCGTCATATTGTCTTACCAGTCTCAAAATTCAT
GTCCCTTAACTTATCATTTGCATACTTCTTTTACCTACTCTGGGCTGCTAGAAGATTAGCTTGAATACTCCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.947446
Expected error %
0.107282
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0187N20
Clone
Clone name
hba-187n20
LE_HBa0187N20
P187N20
Clone type
BAC
Contamination
none
Estimated length
114,658
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found