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Clone Read LE_HBa0175C03_SP6_263616

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0175C03_SP6_263616
Primer
SP6
ID from Seq. Facility
LE_HBa_175_C03-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
610 trimmed for vector and quality, 953 raw
Genbank Accession
DU084761
Sequence
>LE_HBa0175C03_SP6_263616 (raw untrimmed)
GTTNNNAGATTACTTATTGATGCTTTGTCATGGTTGGACATTATTACTAGTAAAATTAGGAATTGAAAGTGGGTCATCTATTCTACTGTTGCGTAAAAAG
GAGAAAAAACAATTGTGACCTTTGTTATAATATTCAGAAAGATTGTTTGTTTAAGTTCAAGACAATATAATTGTGTTGTTTTATTAATTTATATTCTATT
CGTTTTGGGTGAAGCTTTGTATTTCTTACATTGACTTGTTCTTGAGACGATACACATGTGTGGTTTGTTACCATAGCAAACATGGCTTATAGAATTGTTA
GAACAACTTCTTTTCGACTATACATATGAATGGGTACCATGAAGTAGCTGAAAATAAGCTGATGCAATAGGTAGTGAAGTAGTGGTTATAGTCCTTTTTC
TTTCTTAACATGGAATGCAGAACTCCTACTATTGAGAGTTGTGCCTATTGTTCATAAGAGGTCCTTTTTTCTTTGTTGCATAACTCTGATGGGAATCTAA
GTCTTCATGGATCTGGGAGTTGTCAAGTTGGCTGATGATTTTCTCACTTATTTGTCAAGCTTTGTGAAGCATATCCACAATGTAGGGACAAGAAGAGGGA
TGCAATATTTTTTTAACTTAATAACATCTCTACACATGGTTTTCTCTCCTAATTTTCAGGATGCTAGTGGTGATCCAAAATATTTCAGCTCAGAGCTCGG
GTTTCAGCTTTAGGTTTAAATTTAAGCTATTGTCCATGTATTATATTATTAATAGTAAAAATATCGTCGTTTTTGAAAGTTAGTTTTTCCTAATCCAAAT
TTTGGTTTTGGAAAAAAACTTTTTGTTACTAACCTCAATTTATTTTTTTTAAATCCCTCAGAATTAGTTTTTTTTTGAAAATTTATTTTCCGTCCATTAG
GCTTTGGCTTTAGGGGAAATCTCTTTAAAATTCTTAATCTTTTTCTAACAAAA
>LE_HBa0175C03_SP6_263616 (trimmed for quality and cloning vector)
ATGGTTGGACATTATTACTAGTAAAATTAGGAATTGAAAGTGGGTCATCTATTCTACTGTTGCGTAAAAAGGAGAAAAAACAATTGTGACCTTTGTTATA
ATATTCAGAAAGATTGTTTGTTTAAGTTCAAGACAATATAATTGTGTTGTTTTATTAATTTATATTCTATTCGTTTTGGGTGAAGCTTTGTATTTCTTAC
ATTGACTTGTTCTTGAGACGATACACATGTGTGGTTTGTTACCATAGCAAACATGGCTTATAGAATTGTTAGAACAACTTCTTTTCGACTATACATATGA
ATGGGTACCATGAAGTAGCTGAAAATAAGCTGATGCAATAGGTAGTGAAGTAGTGGTTATAGTCCTTTTTCTTTCTTAACATGGAATGCAGAACTCCTAC
TATTGAGAGTTGTGCCTATTGTTCATAAGAGGTCCTTTTTTCTTTGTTGCATAACTCTGATGGGAATCTAAGTCTTCATGGATCTGGGAGTTGTCAAGTT
GGCTGATGATTTTCTCACTTATTTGTCAAGCTTTGTGAAGCATATCCACAATGTAGGGACAAGAAGAGGGATGCAATATTTTTTTAACTTAATAACATCT
CTACACATGG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.935699
Expected error %
0.0104998
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0175C03
Clone
Clone name
hba-175c3
LE_HBa0175C03
P175C03
Clone type
BAC
Contamination
none
Estimated length
111,053
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found