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Clone Read LE_HBa0168E03_SP6_262990

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0168E03_SP6_262990
Primer
SP6
ID from Seq. Facility
LE_HBa_168_E03-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1651 raw
Sequence
>LE_HBa0168E03_SP6_262990 (raw untrimmed)
TCCTTACTCTTTCTCTTTCCCCTCCCACTCCCCATACTCCACTCTCTTTTCCCTTCCACTACCATAACTACCTCCCCTTTTTCTAAATATACTTTCCTCC
TCCTCCCCCATCCCTTAATCTTCTTTATCCTACTAAAGAAAAAAACCTTTTTCTCCTTCTCCCCCCTTTCCTTCTTTTCCTTCTCTCTTCTTCCTCCTCC
ACTTCTCTTCTTTCTCCTCCCTATCCCTCCTTTCTTCCCCTCATAAACCTTTACACTACCACTCTCAATTTCTCTCTTCTCTAATTCTACTATCCCTCCT
CTCATACTTCACACTCCTTCTCCTATCACTATATTATCTATTACATCTATCCTCTCCCTCTCTTTCTCTCATCTTCTCTACTTCTCCCCATTCCACCTTC
TCATTCTCCTTTTTCTCCCACTCCAACTCACTACTATCTTCTCCTCCTCTCCCCTCTACTATCCTCTATTATCTACTACACTTCTCTCCTTCCACACACC
TTTCCTTCTCACTCTACCATCTTTCTCCCTTCCTCTACCTCTCCCTCCTTTTTTTTCTAACTACCTCCCCCTCACACTCCTCCTTCTCTCTCTCATATAC
TCTCCCTCTTACCCTTCCCACTTTTATCTTCTCCCATCCACTCCTTTTATTTCTCTTATTCTTCAACACTCTCTCCCACTTCTTTACTTCATTCCCTCTC
TATCCTATTCTTCTCCCTCTTCTCCTCATTATCTCCTCTCCTTCACATTTATCCCTTTCACTCCCTCCTATTCACCCACCTACCTCTTTCCTTTACTTTC
CCCCTCTTCTCTCTCCTTCTCTCTTTTCCACTAATTTTCCCTCTCTACTCCTTCTTACTTCACACTCTTTACTCTCTTCATACATACACCTCATCTTCCC
ACTCACTTCCCTCCTTTCATCTCCATTACTTCTCATCACCATCTCTTACTCTCTACTAACCACTTAACACTTCCTACTATCCTACTACCCACACACTCAC
ATTCCTTCTCCCCTTACCTTATACCTACTTAATCTACACTTCACTCCACCATATCCTTCCCTTATTTCTATACCTCTCTCCTATCTCTTCTATCATCATC
TATCTCCAAATTTACCTATCACACACCTTCTACCTACTCTTCTTACTTCACCTTCCTTATTCACTTCTTACTCTCTCTCCTTTCACTCCACTTTCTTCTC
CTACTATTACTCTTACACCTTCTTCATCTCCTATCTTATCTTCCTTTTCTCTCACTACCATCTCCTCAATTCCATTCTCCATTTATCCTTTTATCATTTT
ATCTTACCTATCACTCTACTCTCATCTACTTCATCTCCTCCTCCTCTCTGATACTTACTCTTATACCTATACCACACTCATCCATTCTTCCACACTACCT
TCCATATTCCCTATACCTCATACCATCACCAATCTAATTATCTCCTCTACTACTTCACCTCTCTCTTACCATCTCTCTCCTACTCTTCTTCCTACTTTCC
TAACCTTCACCACTTCTCATCACTCTCACTTACTATCCTTCTCTACACATCTTTCTCTCTTCCGTCTACTCCTTCTCTCTCACTTACCTCTATCTACTCT
TTTCTATCATTTCTCTCTCTCCCTCTACTCATATCTCTATATACTCTCTCC
>LE_HBa0168E03_SP6_262990 (trimmed for quality and cloning vector)
TC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.66405
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0168E03
Clone
Clone name
hba-168e3
LE_HBa0168E03
P168E03
Clone type
BAC
Contamination
none
Estimated length
104,664
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found