Clone Read LE_HBa0159L23_SP6_261810

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0159L23_SP6_261810
Primer
SP6
ID from Seq. Facility
LE_HBa_159_L23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
37 trimmed for vector and quality, 1092 raw
Sequence
>LE_HBa0159L23_SP6_261810 (raw untrimmed)
GGTCTGTCAATAGTCTTCTGCACTCTCAGCATAAGGGCATTCTCCATAAGATCCACCATGTATAGTGTCCAACACCGACTTTATTGTTAAGATCCTATCC
CCGATAAAAGTATTCCTTCCGTGACTCATCATCTATACGGTGATTTTGGAACACTTCTCAAGAACTAGATGAATCTATTTGAAGAACTACTCGCTGACTC
CCTTGTTACCGCCATACAATGATGTAAACGTATCTTACGCGTTCAAGTCCTTAATCTCCTCCCTGATTATTGACTACAATACTACATACCTTATCCTCTA
TTGAATTATGTCCTTTTTAGTTTTCCTATCATCTAATAAGTCATCATAGACTTATTGTTTACCTCCTTAAAATCTCCAATCATAGTATTCAGTATTCTCC
TTTAATGCATATACCTTCCTTCGATACGATCTGTTTTTTCTTCACCTCCATTTAAATACTTTCTCATCACCTCATACTTTAAGTTATCCTTTCATTCTCT
TCTTACCAGCTCTTACCCTCTTTCTTCTCTTCTACTCACATTTTATCCGTTTATTATCTCTCCTCTCTTTATGCTTTTCTTTTTCCCAAGATCCTCTTAT
CTATTTACTCTTCTCCTTTTTCTTCTTCACTAACCTCCTGAGAACTCTCACACTTCTAACGTCTTACACTACACCCTGCTACTTCTCTTCTTCTTATTCT
CTCATTCATCCTACTTTTCTATATTTACTTATCTTCTATTCACTTCTCATTACACAAATTTAACTTCATTCTCCTTGTCTCCTAACCACTAATTTTCTTC
GCCTTACATTCCTTTTCATAGTTATTTGTCTCTTCTTATTTATACTCTATTTCGCTCTCTTTTTAATATCTTTATCCAGCCTATATTATATCGATCTATC
TTCGCTTAATGCTTTCTTCTTCTATTACACTACCCTCCATGTCTTACCTTCTCTGTTTTACTATCTACTACTCCTCTTTTTCTCTTATCATTAATTCTCT
ACCACTACATTGTCTTATCTAAGACCATCTTGTTAACTATTTCTTCTCATTCTTTGTCTGCTTTTGATCTTCCATTCATCGCTTCTCTGTCG
>LE_HBa0159L23_SP6_261810 (trimmed for quality and cloning vector)
TATCCCCGATAAAAGTATTCCTTCCGTGACTCATCAT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.809774
Expected error %
0.972404
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0159L23
Clone
Clone name
hba-159l23
LE_HBa0159L23
C12HBa0159L23
P159L23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found