Clone Read LE_HBa0137B07_SP6_260299

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0137B07_SP6_260299
Primer
SP6
ID from Seq. Facility
LE_HBa_137_B07-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1291 raw
Sequence
>LE_HBa0137B07_SP6_260299 (raw untrimmed)
CTCCCACACCCGGGAGTTTTTCAAAAGCCTTTGCAATAGAATGTCAAATTTCTAGTAAGGAGCTTGTATTTAACACTATCACACTTATCCTCAAAGACCC
TCTTAAGAGCTTATTACACACTACATAGAACTATACCATTTCTCTCATAATATATCTGATAGTTCTTAATGATGTGATTTACAACGTACATCCCAACTTA
ATAATATACAAAAATAATGAGTCGGGTCGTTATGGTACTCGAAGATCTCTATAGAGCACACTCCACTGCACCATCGCACCTGTATAGTGATAATACTAAT
CTATGCACGCTGATCATAGTGATATATGTGTTAATCCTCTCTATAACTCCTGCATTGCTGTATGGGGACGGCTTGCACTTACGCGTCTTCTATGGGTCGT
AGTACTGAATGTTGTATCGCGTACACCTTTGAAGTACGACTACCGCCCAATAATGATAACACACCAAGATGAATTAAGTTCGCATTCCCTTGGCACACAT
TATTATCATCTGTATGTAAGGTTATCTATTCTAGGACACATCTCCAATAATAATGACAATTCCAATTATGGATATGATAACTTAGAGTAATGTATCAACA
ACTTCCATCGTATCGATCAGCGTTTAGCCACTGGTACTACTAACACTATACTACCCCTGAACGTAGAGTCATATCTTCATTCCAACTCTATTATATACTC
TATAGAAGTGATCTCTCACTACTTTATTCTTTATCCTACGCAATATTCTATCGTAGGTATATTCTACTTTTCCGATTTAAGTCTATCGAAGTAACTATAC
AATGATTGTTATCTATATTATTGTCTCTTTTTCTTTGTCCCTCAGTCATCCGATTGCCTCTTGAAACTATAATACCATCCTCCGTGCTCAACAACATATA
CACCTAGTGTCCTGGGACGTGGTGAAATCACTCCGACAACTCTGAATATCCGGATCTCTCTACACATATATACTTTTATCACTTCTTTCCACTCCCTGTT
CTATTACTCCACTTCTTATTCTACGACTATCATTCAGGCTCCATATACCTGCTCCTTTCATCCTCTCGACCTTCCTTCTACTGCTCTTGTTACACAGAAT
GTATACATTCTTCACTTATCATTTGAGCGCTTACTTACTCGTGACTATCACGTAATGCCCATAATATTTCTATACGATATATTTCCTTTTGCTTCATATT
CTACATTCTAATTTTTATCAAGTAACATGATAGAATTAAATTATATTTCTCTCTCTACATCCTTACCTTCTAATATAGGGTTCTTCTTTGT
>LE_HBa0137B07_SP6_260299 (trimmed for quality and cloning vector)
AT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.24822
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0137B07
Clone
Clone name
hba-137b7
LE_HBa0137B07
P137B07
Clone type
BAC
Contamination
none
Estimated length
85,209
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found