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Clone Read LE_HBa0125J22_SP6_260026

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0125J22_SP6_260026
Primer
SP6
ID from Seq. Facility
LE_HBa_125_J22-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
568 trimmed for vector and quality, 885 raw
Genbank Accession
DU081678
Sequence
>LE_HBa0125J22_SP6_260026 (raw untrimmed)
GGTGTAGTGCGACAGAGATAGGAAGAATTTAAGAGGGCTCGAACTATGGGGTCAAATATGGAGCTAGATGGTAATTTTAGGCCCCCATTCCATTGGTATC
CACCTTGGCATGTTGGTAGTGTCTCAACAAAGGTGCAGGGACCGCAAGTTTTATGGTTATAGTTTGTCAGGACCTGGACATAGCTCAGGTGAGTTTGATG
GCCATCAATAGGATCTTTCTGTGCATATAAGACATCCAACTCGTCGTTGTAGACAATGCGGTAAGCCGAACACTAGGAAGTGTAGAAGGGTTCAGGTGCA
TGTTATCATTTCGAGCAGACATGACATTTTATTAATCCGTGCCTGAGGTTGAGCAGAGGTGATATACCTTAGACTTCCGAATCCACAACAATATCTTCAC
TCTTAGTCTATGCCCCACGACAAGGACAACAGTCTACTGAGGGTCCTTGTAAAGGGACAGGTGCAGGAGATACATGTTCGAGTGGTGGTAAGAATAGCTT
TTATGCAGTCAAAGGATGACAGGAATATGAAGCATCCCCTGATGTTGTTACAATATATTGACGATATCATCTCAAATTGGGTACGTATTAATAGGCCCTG
GTTCTTAAATTACCTCATTTATTTCTAGTAAGATTTACATGAAACCCTGATTTGACCCGCAACCCATTTTACCTTGTCTACCCCTTATTGCCACCTCTAG
TAAAACCTAGTCTTGTCCAATCCAGGAAACCACCTTGTTAAATTAATGATAATCCATCCCCCCATTGGATTTATTCAAATTCAATATGCCCAAATTTTTT
ACCGTTTTTATTGGGGTATCGGATTATTTTGGCCACCCTTGTTTTTTTACTCTAAAGAATTTATCCCTTTTTCGTGGTAAAGCAA
>LE_HBa0125J22_SP6_260026 (trimmed for quality and cloning vector)
TAGTGCGACAGAGATAGGAAGAATTTAAGAGGGCTCGAACTATGGGGTCAAATATGGAGCTAGATGGTAATTTTAGGCCCCCATTCCATTGGTATCCACC
TTGGCATGTTGGTAGTGTCTCAACAAAGGTGCAGGGACCGCAAGTTTTATGGTTATAGTTTGTCAGGACCTGGACATAGCTCAGGTGAGTTTGATGGCCA
TCAATAGGATCTTTCTGTGCATATAAGACATCCAACTCGTCGTTGTAGACAATGCGGTAAGCCGAACACTAGGAAGTGTAGAAGGGTTCAGGTGCATGTT
ATCATTTCGAGCAGACATGACATTTTATTAATCCGTGCCTGAGGTTGAGCAGAGGTGATATACCTTAGACTTCCGAATCCACAACAATATCTTCACTCTT
AGTCTATGCCCCACGACAAGGACAACAGTCTACTGAGGGTCCTTGTAAAGGGACAGGTGCAGGAGATACATGTTCGAGTGGTGGTAAGAATAGCTTTTAT
GCAGTCAAAGGATGACAGGAATATGAAGCATCCCCTGATGTTGTTACAATATATTGACGATATCATCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.973795
Expected error %
0.117168
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0125J22
Clone
Clone name
hba-125j22
LE_HBa0125J22
P125J22
Clone type
BAC
Contamination
none
Estimated length
98,267
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found