Clone Read LE_HBa0125J18_SP6_260019

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0125J18_SP6_260019
Primer
SP6
ID from Seq. Facility
LE_HBa_125_J18-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
581 trimmed for vector and quality, 928 raw
Genbank Accession
Sequence
>LE_HBa0125J18_SP6_260019 (raw untrimmed)
AGCTAGGAGTAGAATCATAAGATACTATTCATTCTCTAATCTAGAAAGCTTGATTAGTTAATGTTATAAAATATTCTATGGCTTAAAATCAACATAAAAA
GCATTCTATGTCTGTTTCTATATTTCTATCATTTAGTCCATGTTAAGAATATCTTTTTTATACAAGAGCCAACTTGTTTTACTTGTTACAAGTTTTTTTT
TATAACGATGTTATATCATATCAACATCAATTATCTTTCTCATTTTTAGAATTAAATGTACAATGTAAGTTCCATACATCACCTATATTGCTGAAAAGAG
GATCCAATAGTGTCTTAGCATTTGGAGAAAGCGACTAGGCTCAACTATTGAACTAGACTATAGAATTCATCCATGCAGTTTAATTTGAAGGATAGGAATA
CTAAAGGTTTTGAGAAGAATGAGGCTACAATGGAAAATATAACCTTTAGAGTTGATTTTTTTTTTGTGTTAGAGCTACTGCACAGCCAAACTTTTATTAG
ATAGATGTAGCTTTTATATTTTTTGAGTTTTGTAAGAAGGTAATAACTTCCGTTTTTTTATATATGTAGTACTGGGCTAATTAGTTTTGTGAATATCCAC
TTTGGTGATCAATAAATCCTAATTACCAATTATCACCTTATTCAAGTAAAGTTCAATTGATTAAAACAATAAAATATGGAGTTCATTCCTATTGGCCACA
CGTTTTTCCTCTACCCAAGAAGTGATTCAAGGGTATTTAAATTAACCTCCCTGTACTTCTTTATAAAGCGGGACCAATAACAATTTTAAAAAAAATCCTT
GGTGTCTGCAAAAAACTGCTTCCAATCAACTTGGTTCGGGGGTCTTTTTAATACTTTTTTAGAATATAAACCTCTATTTAATTATTTAATTTGCTAATAT
TTTTGTAACATATAGTTTGTTAATGGTG
>LE_HBa0125J18_SP6_260019 (trimmed for quality and cloning vector)
ATAAGATACTATTCATTCTCTAATCTAGAAAGCTTGATTAGTTAATGTTATAAAATATTCTATGGCTTAAAATCAACATAAAAAGCATTCTATGTCTGTT
TCTATATTTCTATCATTTAGTCCATGTTAAGAATATCTTTTTTATACAAGAGCCAACTTGTTTTACTTGTTACAAGTTTTTTTTTATAACGATGTTATAT
CATATCAACATCAATTATCTTTCTCATTTTTAGAATTAAATGTACAATGTAAGTTCCATACATCACCTATATTGCTGAAAAGAGGATCCAATAGTGTCTT
AGCATTTGGAGAAAGCGACTAGGCTCAACTATTGAACTAGACTATAGAATTCATCCATGCAGTTTAATTTGAAGGATAGGAATACTAAAGGTTTTGAGAA
GAATGAGGCTACAATGGAAAATATAACCTTTAGAGTTGATTTTTTTTTTGTGTTAGAGCTACTGCACAGCCAAACTTTTATTAGATAGATGTAGCTTTTA
TATTTTTTGAGTTTTGTAAGAAGGTAATAACTTCCGTTTTTTTATATATGTAGTACTGGGCTAATTAGTTTTGTGAATATC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.909873
Expected error %
0.0337955
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0125J18
Clone
Clone name
hba-125j18
LE_HBa0125J18
P125J18
Clone type
BAC
Contamination
none
Estimated length
117,332
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found