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Clone Read LE_HBa0185G24_T7_257836

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0185G24_T7_257836
Primer
T7
ID from Seq. Facility
LE_HBa_185_G24-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
142 trimmed for vector and quality, 1082 raw
Sequence
>LE_HBa0185G24_T7_257836 (raw untrimmed)
GGGGTCTCTAGAGTCGACCTGCAGGCTGCAAGCTTTACTGACCGATTTTTTGTTTTTTTTTTATTTATTTTATTTTCAATCTCCCCTGTAGTTAATGCCC
GGGGAAACTTTTATCTACGTACAAATACTGAACCGTATAGTACCAACTTTCCTTAGGCCGCGCTTAGCTCTCTGTGAAAAAATCTTCCCCGTTGGCGGAA
AGAAGAACACTTTTGTGGAGAGGACTCCCCCCCCTCGGTAATTATAAGATTGTTTGGCGGGCCCAACCGAAAAATATTTTATTTTAATATTTAAGATCAG
ATCTGTGAATTTGAGGATTTATAACTTATGGTTTATTACAGATAAGTTACATGCTAGCTTCTTGCTTATCGCTGGTAAGGAGGATGGTAAAGACCTCCGC
ATATATTAATGCGAAACATAGTAGGCATATTATTATATCTCTTAAGTGGACTTACCATAACTTTACATAGTGAACCTATTGTGAAAATTTTAAAATAAAA
TAATAAGTTACTGTAATAAATTAAATTGAGATGTCTTTTTAAAAAAAAATTTTACCTTTCCTTTCTAGATCTGCAAAATCAAAATTCCAATAGTTTTCTT
TTTCCTTCATAGATGTGATTACTTTGACGCTTTGTTTAATTGTGTTCAACTATGAGTTATCCGGAGTAGCGTCTTCTGTACATCCACCCTTATTTGCAAT
AGTTTAGCATGCACTGTTTTCATTCTTTTATATTTACCCTCGTTCTATCTTTATTTCATTATTCCCTTTTTCTTTCCTCTACTTTCTTTTATCATTTGAC
GCAGTCTCATCATCTGTCATATATAGTCTGTTCTCCCTTTCCCCTAGATTTGACTCTAATTGGATGCTATGTCTTTATTTATTTCCTCATGCAATACACG
ATCCTTTCGACTTCTCATTATTGCTCTTTCTCTCTATGCTTTCTAATATCTTCGTAATTATCGTCTCTTTTACTCAGTTTGTCTACTAGAACTTATAATA
CTTTCACGTTTTTTCTCTTTCTCATGTACCATTCACATCCTCCCTATACTTTGTTCATAGACCTATCTCCGGTCCTCTACAT
>LE_HBa0185G24_T7_257836 (trimmed for quality and cloning vector)
CTCTAGAGTCGACCTGCAGGCTGCAAGCTTTACTGACCGATTTTTTGTTTTTTTTTTATTTATTTTATTTTCAATCTCCCCTGTAGTTAATGCCCGGGGA
AACTTTTATCTACGTACAAATACTGAACCGTATAGTACCAAC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.924454
Expected error %
1.1659
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0185G24
Clone
Clone name
hba-185g24
LE_HBa0185G24
P185G24
Clone type
BAC
Contamination
none
Estimated length
79,467
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found