Clone Read LE_HBa0140H22_T7_254554

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0140H22_T7_254554
Primer
T7
ID from Seq. Facility
LE_HBa_140_H22-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
18 trimmed for vector and quality, 969 raw
Sequence
>LE_HBa0140H22_T7_254554 (raw untrimmed)
NNTTGATGTCGGGGATCTCTGAGTGACCTGCAGGCATGCAAGCTTGCAAGTTCGGTATCTATCCCTTTCATTGGACCTCCAAAAGAGAGCATCGCCCTCA
CATAGAATCCTACAAATACACTGTAAATCTATAAGCATAAATATGTGATCAACTATCCCCCACCAAATGCTGCCGTCACAATAGAGATTAACACGGTCTT
GTGCACCCACAACCTCTTCGGTTACTCCTCTGGGAATACCACCTTGAATCTCCTTACCTGAACATGTGACTACGACTGCTCACTCTCTAAGTGGTTTGTC
ATCACACCTGACATCAAATACCCATTTTCATGTACCACTAGTATCACCTTCTGATCTCTGTCAAATCCGCCACTAGGACACTTCATATCCATGGACAATA
TTGTACCCAAATAACCTACACATTCTCTGTCTCGATTTTTAACTTACATCCACTCTCATACCATTTCTGATTCTGTGCCTAAACGACTAGCATCCCTCTG
AAAATCTGGTCTGGGACTTCACTAACGCACGCCATCACTCTAACAAACTAAGCATTCATATATGTTATGCGGACAGATATCAACCTCACATCGATTCATC
ATATATTATAATCATTTTCATAACAACTCACTCATGCTATGATAACTCTACTAAATGCAGCTTACAACATCACATGTCCATTGACCAGATCTCCATTTTA
TCCGTTTCACTTTCACTGGTTAAAACCACTCTAACTATTTGTGTATACCACATAAACAACACTTCACCTAACTTGGGTAACCAAACTTAATTCACCCCAG
TGAAATTTTTGAACCTTTTTAAAACTGAACCACCCCTTTTTTTTAAAAAGCCCCCTACCCCTCCCCGAAATAGCCGGATCCAACCTTCAAATAACAAACC
AGCTACACGGCCCCCCTTTAAGAACTTCCCCTTAAATCCTCCCCAAAACTGAAAAAAAAATGTAATGAA
>LE_HBa0140H22_T7_254554 (trimmed for quality and cloning vector)
CCTGCAGGCATGCAAGCT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.370613
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0140H22
Clone
Clone name
hba-140h22
LE_HBa0140H22
P140H22
Clone type
BAC
Contamination
none
Estimated length
96,876
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found