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Clone Read LE_HBa0006E23_SP6_2540

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0006E23_SP6_2540
Primer
SP6
ID from Seq. Facility
LE_HBa_006_E23-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
857 trimmed for vector and quality, 946 raw
Genbank Accession
DU022752
Sequence
>LE_HBa0006E23_SP6_2540 (raw untrimmed)
AAAAAAAAAAAGTTTTTTCTTCTCACTATGTCACTAACAAATGCCTTAAACGACTANGAACATACACTTTTAGAAAAATGTAGAAATATGGTTCCGTACA
GGAAAATTTACAAAGTATGATAGCAATGCAAAAAGCATGCTTAAAAAGGATATTTTTGTTGAAAAACATGCTCTATGCCAATTGTGAGAAACATCATGAA
ATTTAGTATAGAAGGCATAAGATACAAACATAATCAACATATAATACATTACATCATATTAGAACCATCATCTTAAGTAACATAAGTTATACTTGTGCAA
TGTAACAATGGTATCTCATACTACCATTCATGCTAAATACCACTTAGAGACAACCAAAGATGAACTTACCATTCTTCATACTCGTCTTTATTCAATACTC
ATGCATAAGGAACATTAACTTTTAGTACGTCATGAAAGAGAAAGTAACTCATAATAACATTTCTAAATTAAGCATTCATCATATCATTAAGCATTTAAGT
CAACATTCTCATTAGCTTCATTGTGAGCACATTCATTTCAATAGAATTAATACACCGGAGAATCACAACATAGCCATCTCAAAGCCTATTCGTGCAATGC
ATGAATGACATCCCATACTACCACCCACATTTCATATAACCTCTTGAGTAACCATACCACATATCTCACATGATAGGAATAAACATTAACCGACATAGAC
CGTGTGAGCTAAACATGGAATCTGGTGTCTATCCCACAACGTAAAGGGTTTGTCTACTTGCCAAAGGTAGGACCCACAATATTTTAGGTTAGGTGGATCC
ACTAGCTAATAACTTATGGGGGCACATAGTTATGGAATAAGAAATAGGTTCATTGAAACCCGACATAATGTGGGGAGAGCTCCATATTACCATATCACTC
NGTGCTAAGCTTGAATTATATAAAGTAGTTCATCTCATAACATTAG
>LE_HBa0006E23_SP6_2540 (trimmed for quality and cloning vector)
AAATGCCTTAAACGACTANGAACATACACTTTTAGAAAAATGTAGAAATATGGTTCCGTACAGGAAAATTTACAAAGTATGATAGCAATGCAAAAAGCAT
GCTTAAAAAGGATATTTTTGTTGAAAAACATGCTCTATGCCAATTGTGAGAAACATCATGAAATTTAGTATAGAAGGCATAAGATACAAACATAATCAAC
ATATAATACATTACATCATATTAGAACCATCATCTTAAGTAACATAAGTTATACTTGTGCAATGTAACAATGGTATCTCATACTACCATTCATGCTAAAT
ACCACTTAGAGACAACCAAAGATGAACTTACCATTCTTCATACTCGTCTTTATTCAATACTCATGCATAAGGAACATTAACTTTTAGTACGTCATGAAAG
AGAAAGTAACTCATAATAACATTTCTAAATTAAGCATTCATCATATCATTAAGCATTTAAGTCAACATTCTCATTAGCTTCATTGTGAGCACATTCATTT
CAATAGAATTAATACACCGGAGAATCACAACATAGCCATCTCAAAGCCTATTCGTGCAATGCATGAATGACATCCCATACTACCACCCACATTTCATATA
ACCTCTTGAGTAACCATACCACATATCTCACATGATAGGAATAAACATTAACCGACATAGACCGTGTGAGCTAAACATGGAATCTGGTGTCTATCCCACA
ACGTAAAGGGTTTGTCTACTTGCCAAAGGTAGGACCCACAATATTTTAGGTTAGGTGGATCCACTAGCTAATAACTTATGGGGGCACATAGTTATGGAAT
AAGAAATAGGTTCATTGAAACCCGACATAATGTGGGGAGAGCTCCATATTACCATAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.949092
Expected error %
0.523947
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0006E23
Clone
Clone name
hba-6e23
LE_HBa0006E23
P006E23
Clone type
BAC
Contamination
none
Estimated length
83,647
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found