Clone Read LE_HBa0087A23_T7_24237

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0087A23_T7_24237
Primer
T7
ID from Seq. Facility
LE_HBa_087_A23-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
163 trimmed for vector and quality, 807 raw
Sequence
>LE_HBa0087A23_T7_24237 (raw untrimmed)
TTGGTTGGTTCCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGTTTAGTGATTAGTTCTCATCACTTGTATTGATCATTATTAATCATACA
TGTGAGTGTGCTCACTACTATAAATCTAGAATACATGTTCTTAATTAAGTTGATTTTTTATTCTAAATACGTGCTTAACCGAGTGTAATTTGTAGTTTTG
AAAATTTAACAATTCGGAGGACCTATGAAGGAACCTGGTTGTGGGCTCAAATTGCATTTCTTGGCAAATTGGGAAAAAAACAAAAAATTGGGAGCAAGTC
CCCCACCATTGGGCAAAAATGGAAAAACCCGCCAGGTACCTCTCACAAAGGGATTTGATTATTTTTTTGAACCCTTTCAAAAAAAAAAAAAAATCCCAAA
TCAACTCCCCAATTTTTTATTAAAAANAAAAATATAATAAAAATTTATAAAAGTTAAAATCCNNGNNNNNNNNNNNNNNNNNNGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCCCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNGNGCGNNNNNNNNNNNNNNNNGCGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTTCCNNNNNNNNNNGNCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNN
>LE_HBa0087A23_T7_24237 (trimmed for quality and cloning vector)
AGCTTGTTTAGTGATTAGTTCTCATCACTTGTATTGATCATTATTAATCATACATGTGAGTGTGCTCACTACTATAAATCTAGAATACATGTTCTTAATT
AAGTTGATTTTTTATTCTAAATACGTGCTTAACCGAGTGTAATTTGTAGTTTTGAAAATTTAA

This is probably not a useful sequence.

Problems:
  • High predicted error rate
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.881735
Expected error %
4.0652
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0087A23
Clone
Clone name
hba-87a23
LE_HBa0087A23
P087A23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found