Clone Read LE_HBa0084O03_SP6_22564

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0084O03_SP6_22564
Primer
SP6
ID from Seq. Facility
LE_HBa_084_O03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
637 trimmed for vector and quality, 788 raw
Genbank Accession
Sequence
>LE_HBa0084O03_SP6_22564 (raw untrimmed)
GCAGGCTAATCTGCAGTTTTTCCCTTCTCGATCGTCTCTCTCTCTATCGATTCCCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCCCAACCCTC
TTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGGTGGCAATAATGACCCACTAATTAACTTAAGGTTACCTCTTTTAACCCCCAAGTAATTAGA
CTTATTAACATTAACCCTCTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTTCGCA
GTCTGTGACGGCCCGTCGTGCCTGTGACGGCCTGTCGCGCTGCCCGTCACAGAGTTCATAGACTCAATTTCTCTGAAGAGTCTGTGACGGTCCGTGACGG
TCCGTCCTGCTGCCCGTCACAGAGTTCATAGACTCAATTTCTCTGAAGAGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCACACCTGTGACGGTC
CGTCCTGCCATTCCGTCACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCGTCGT
GCCCATGACGGTCCGTCGTGGGGTCCGTCGCCTCAGCCTGTTTTTCCAGAAATAAAAATCTGCTACTCAAAACGACTAAACATGTCGTTACACTCAAAAA
ACTTGATATGTAGTTCCTAACCTATTATTTTTATATTAATAATTAATAACCGTTTTTTTTCACTTTTAATTTACATTAATTTTTACAA
>LE_HBa0084O03_SP6_22564 (trimmed for quality and cloning vector)
CCCTTCTCGATCGTCTCTCTCTCTATCGATTCCCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCCCAACCCTCTTTCTTTTACCCTAATTAGTA
TATAATTAAGAATAAAAGGTGGCAATAATGACCCACTAATTAACTTAAGGTTACCTCTTTTAACCCCCAAGTAATTAGACTTATTAACATTAACCCTCTA
ACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTTCGCAGTCTGTGACGGCCCGTCGTGC
CTGTGACGGCCTGTCGCGCTGCCCGTCACAGAGTTCATAGACTCAATTTCTCTGAAGAGTCTGTGACGGTCCGTGACGGTCCGTCCTGCTGCCCGTCACA
GAGTTCATAGACTCAATTTCTCTGAAGAGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACGA
AGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCGTCGTGCCCATGACGGTCCGTCGTGG
GGTCCGTCGCCTCAGCCTGTTTTTCCAGAAATAAAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.970973
Expected error %
0.142653
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0084O03
Clone
Clone name
hba-84o3
LE_HBa0084O03
C12HBa0084O03
P084O03
Clone type
BAC
Contamination
none
Estimated length
58,197
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found