Clone Read LE_HBa0084A16_SP6_21918

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0084A16_SP6_21918
Primer
SP6
ID from Seq. Facility
LE_HBa_084_A16-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
582 trimmed for vector and quality, 833 raw
Genbank Accession
DU038675
Sequence
>LE_HBa0084A16_SP6_21918 (raw untrimmed)
AAAATGTTTTTCCCCCGCTATCTGACAAGATTATGAAGATATTTTAGGGCACACCGAAAAGTAAATAGTGATTAAAAAGGGAATGGTGCATTTCGTATTT
TTTGATCATTGGAATTTCATTAAGGCTGCTCTTTTGAAGTCCAAGTACTTCTGTTTGGTTGGAGATAAGCTGGGTGTGGGCATTGGGGTTCAAATCACAG
CACTGACAAGAAAAGAAAAGAAAAAGACTCCACAAGTTCTTTGCACCCTCCTCAGGCTAGGCAAACCGAGTTACTCGGTACCTATGATGTTGGGAGGTAG
TAGGTACTAGGTACCAGGTGGAATAGTCGAAGTGTGTGTACGGTGGACAGCACTGTTTTTAAAAAAAAGTTAGATGTGGGTATTGTTCCATCAGACTTCC
AGAGTTTTGATGATGAATCAGGTGGGGTCATTGGTTCTGTCAGATGTGCAGAACCTTAATAGCTACCTTAACCATGGTGATTGTTTGTGAATGTTATTTT
GTAGTCCATCTTTATGTTTTGACATATTGAGCTTGGTTGTTTTATTACGTAATACCATAGATCGTAAGTGGATCCCTCTTTCTTCTTCCCGTTTCCTTGG
AGGGAATTATGTCCTAGACCCCCGATGCTCACTTTAATTTTCTTTTTTTCTTATTTTATTGCCTGCCCCACTTTTAAGATAAACTTTCCCTCGGATATTC
CCCCTATTTCAATTTCCCTCCTCTGCCCTAGTTTCGGGCCTACTACTCTGCCCCCGATGACCGGGCAAGAGAATATTGCCTGTTATAACCGGAAAACCGA
ACCGAAGGGAGGACCACACCGGGGCCCTATTTC
>LE_HBa0084A16_SP6_21918 (trimmed for quality and cloning vector)
ATTATGAAGATATTTTAGGGCACACCGAAAAGTAAATAGTGATTAAAAAGGGAATGGTGCATTTCGTATTTTTTGATCATTGGAATTTCATTAAGGCTGC
TCTTTTGAAGTCCAAGTACTTCTGTTTGGTTGGAGATAAGCTGGGTGTGGGCATTGGGGTTCAAATCACAGCACTGACAAGAAAAGAAAAGAAAAAGACT
CCACAAGTTCTTTGCACCCTCCTCAGGCTAGGCAAACCGAGTTACTCGGTACCTATGATGTTGGGAGGTAGTAGGTACTAGGTACCAGGTGGAATAGTCG
AAGTGTGTGTACGGTGGACAGCACTGTTTTTAAAAAAAAGTTAGATGTGGGTATTGTTCCATCAGACTTCCAGAGTTTTGATGATGAATCAGGTGGGGTC
ATTGGTTCTGTCAGATGTGCAGAACCTTAATAGCTACCTTAACCATGGTGATTGTTTGTGAATGTTATTTTGTAGTCCATCTTTATGTTTTGACATATTG
AGCTTGGTTGTTTTATTACGTAATACCATAGATCGTAAGTGGATCCCTCTTTCTTCTTCCCGTTTCCTTGGAGGGAATTATG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.965295
Expected error %
0.390553
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0084A16
Clone
Clone name
hba-84a16
LE_HBa0084A16
P084A16
Clone type
BAC
Contamination
none
Estimated length
39,504
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found