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Clone Read LE_HBa0080E01_SP6_20544

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0080E01_SP6_20544
Primer
SP6
ID from Seq. Facility
LE_HBa_080_E01-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
563 trimmed for vector and quality, 798 raw
Genbank Accession
DU037595
Sequence
>LE_HBa0080E01_SP6_20544 (raw untrimmed)
TTAAAGGGTGAAAACGTCGCGATGGTAATTATTCAACCTTTATGGGGATATATATATATTTCTACATCTTCAAAGTCAACCTTATGGTTGTTTGACTACC
TGATGGAAGTGGACAATTAGGTTTTTTTAACTAGCTTGTTAGGGTAATTAATTACGTTATCACAAGAAGTTAACTATATTAATTTATCATAAAAATAAGA
AATTAAATAAAAGTGATTTGAAATTTGACACACATTTAAGAACATTAATCAAAGAAAATTTATGGTCATATATATTTCCAGACTCTTTTAAAAAGTAAAT
ATATTCATTATTTGAGATTTAGAAGTAGATAAAATAAAAAATAATAATATAATTTGTACGTTAAAATAATTATTTATGTAGAATTTGAATTGTTTTTTTA
TCATTGAACTAGAGGGAGTATCTATAATAATAATAAAAATTATAACATAAAAACTCACTTATCTAAATATGAAATGAGTAAGTATACTTGAAAGAAAATA
ATTAATGCCTTTTTAATTATGTTAAGTTTTACTTATTTTGGGATCAAAGTAAAAAAGCTAAGTAAATAAATATATATTATAAATTTACAAAATAAAAATA
ATTGTCTTATATACCAGATGAAAATTCTACCTTTTTTAGATAAATTAATAATAAAAATTTCCAAATTAATTATAAACTATGGACATAATATTTTTAAATT
AAACCCCCAAATAATGACGGATCCAAAGGGATAAATAGTAACTATCCCAGTTGACGGACCATCTCAAATTGAGCCTTTATATGTGTTGCCCCGCCCCC
>LE_HBa0080E01_SP6_20544 (trimmed for quality and cloning vector)
TATATATATATTTCTACATCTTCAAAGTCAACCTTATGGTTGTTTGACTACCTGATGGAAGTGGACAATTAGGTTTTTTTAACTAGCTTGTTAGGGTAAT
TAATTACGTTATCACAAGAAGTTAACTATATTAATTTATCATAAAAATAAGAAATTAAATAAAAGTGATTTGAAATTTGACACACATTTAAGAACATTAA
TCAAAGAAAATTTATGGTCATATATATTTCCAGACTCTTTTAAAAAGTAAATATATTCATTATTTGAGATTTAGAAGTAGATAAAATAAAAAATAATAAT
ATAATTTGTACGTTAAAATAATTATTTATGTAGAATTTGAATTGTTTTTTTATCATTGAACTAGAGGGAGTATCTATAATAATAATAAAAATTATAACAT
AAAAACTCACTTATCTAAATATGAAATGAGTAAGTATACTTGAAAGAAAATAATTAATGCCTTTTTAATTATGTTAAGTTTTACTTATTTTGGGATCAAA
GTAAAAAAGCTAAGTAAATAAATATATATTATAAATTTACAAAATAAAAATAATTGTCTTATA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.84861
Expected error %
0.318763
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0080E01
Clone
Clone name
hba-80e1
LE_HBa0080E01
C02HBa0080E01
P080E01
Clone type
BAC
Contamination
none
Estimated length
127,564
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found