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Clone Read LE_HBa0178E18_T7_203622

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0178E18_T7_203622
Primer
T7
ID from Seq. Facility
LE_HBa_178_E18-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1794 raw
Sequence
>LE_HBa0178E18_T7_203622 (raw untrimmed)
TTGCTGACGANAGCNAACGCTACGTCGACGCGGACGGAGGGCGGCCGGCGGGAGTCTGGGCGTACNCATCGCAGATCGTCTGATCGTCGCGGATGAGACG
AGTCGGTGCGCCTGNCGACGACTGAGNCACATAGATATCTAGCCGCCGCTATNACTTCCTGACGCAAACCTCACATATTTATGAGATGCGTTTTGTGTTA
GACGACATCATTATAGTGAGACAAGGTGGATATGCATGTGGCGTTGTTAGCTCATCTTACACCGCGAGGTGACTGCGTANGGAGATGTGGACGGATGANG
ATCGCGTGATAGCATACATTATGTTGTGCCTGAGATTTGTGATGCGTGACGTAGCTCTCTGTATGGCTCATTACTACAATATGACTAATACTACATTTGT
TGATATGTACANGCGGGGATCACGANAGGGCGCGGCNGANAACGTTATATGATCGAGATCGCGCAGCACGACGCGATATAATCGGGTGATATGTGACACN
TNAATGCGACGAATTATAATGANTACGAATACTACCNGACATAACTGTACCATTGCCGANCAAAGGCGTATCTGGCGATCAANGCGCATCGTTACACGAG
CTCATGACGATACGCTGNTCTGATGTNGATTNACTGTTCGCTNACTTACGTTCATAATTCGTGTGAACTACNCTNCNTACAAGACGGTAGATGCGCGTAT
NCTAGACACGCACTCACTTTCACCTATGCTTATGCGTGGGTGTNATTGAGACATGCTCTCATCATATTANTGGAGTGTAATGCACACGGAACTGCGNAGA
CTGCGATACGACTGCGGATCCGNTACCTCCCTGTCTACGTACCTGATGCACTACAACTGACAGAGCAATATGTATGCTGCTAAGACATGATATATTGTAT
ATTGAATCTACTGCACATCATGCAATGTGACAATAGTNGAGGATACAGCATGTATCATAGACGATGTGTAGTTCNTACGCTGATCACCTACNGAACGACG
NCTCATGCCTAAACGAGATAATAACTCGGACGATCATGATAAGTACAAACCATGAGACACTTACATGCATGTGTAACATGCAACTTATGTTAGCTANCTT
CAGTAGAATAATCTACGTATGATCTTCANTNATGCATTATGACATATATGNGGGNGAAACTGNCGACATGATACNATCTNGNTGAAGCGACGATGATGAC
GNGCGTAGCGNCAANATTGCATGCGCTGAGATGCTAGGACTGACAAGCNCACATACAGATACAAGANCNCNCNGATGTGAGTACGACNACGNCGCGAGTA
CTGACTGAATAGTGATTGCAAACTGCTACGTGATTACATGAATGATGCAACTACATATCTCTGATGACACATACTCATGTGCGCGNCNGCACTATGACGT
GCTATTGAATATACACATATCTNCAGAGTCTTGGTCTTGTGATGTAATACGATACGGNGTGGATATTGATTTAGATTAGTGCGTGATCGTACTACGCGCN
GTTCACTTGNGCTACACAATATATGTGATATGTNTGNAGTGCTGACTGCATTGTGAGGATGTTTGTGTGACACGTTGAGCGGCTTAGAAGAGGCGTGAGA
GCNTGTCACTGCGNAACGCGGACNCGTGGCACTGTGCGACGACACGCAGCATGGGGTCANTGCGCGTGGCATACGTGNCTTGCTNCNANATAGTGCGACT
GTTACGCTACAGTTAAGCTATGTCGTATACCAGGATGCCGGTACGTAGTAGAGCGGTGTGATTGCAATATAACTGTGATGGAAACGAATTGTTG
>LE_HBa0178E18_T7_203622 (trimmed for quality and cloning vector)
CA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.02663
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0178E18
Clone
Clone name
hba-178e18
LE_HBa0178E18
P178E18
Clone type
BAC
Contamination
none
Estimated length
95,697
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found