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Clone Read LE_HBa0077N09_SP6_18688

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0077N09_SP6_18688
Primer
SP6
ID from Seq. Facility
LE_HBa_077_N09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
687 trimmed for vector and quality, 965 raw
Genbank Accession
Sequence
>LE_HBa0077N09_SP6_18688 (raw untrimmed)
AAAAAAAAATGGGGTTCCGCCAGCTATAGCAGAGTAAAAACAAACTGAAATTAAAAAATGTTCTAGTTTCAAATCCATACCCTGCACTTAAAATGACAGA
TTTAAATCAGTAAGTCAATCAACTCAATATGAGAATAAACACACAATTGAAACTGATATATTAACGATCAGCTAAAATTGATATGTTATTATGTAATATT
TTTTATTATAATGCAATATTTAATATTCACGATATATAAAGCTCATCGAGAAAAACCGCTTTAAACTTCTTCAATTGGACACTCATCTTCAGAAATGTCG
TGGAAGTTCCAAACAAGTACTTCCCAAAAAGGTCGTAATCTACTTCTAGAAATACCAATAACATGTCCACACATTTACCAGCTCTATCTATATAATAAAA
CCAAATAATCACCTTTTCTTCTATATATTATACCGTTTCGAGTCATCCTTGTCTGCGCACGTGGGTTTATATCAAAAATTAAAAAATTTATACTTCATTA
TATTTGATATTTATTTTGAAATAGAATTAAAACAAAAGTTATATAAAAAAAAATCTCAATTTAATACTAATGAATTTCACATAAAAAATATAACTTTAAA
TTTAAAATTTCTAATTAAAAATAAAAAAATATTTTTCACTTTGCTACGATTATTTTCTTGAATAATTGTATATAGTTCTCTTATCTATTAACCACATAAC
GTTTGCGGGTCTCCCAAGTATTTATCTCTATAATCTTCCAAACCCTTATTTCCCCCAAGTTTCCCCATTTTCAGTCAAGACTTTTTTTCCCATACCTTTT
TGTCTTTTTTTCCCTTTTTTCCTTCATATCCCTTTCCAGAAACAACCTCTTTATGCCTAACTTTTTCCTAATCCTACCCATTTAACCTCTCAAAAAATTC
CATTTCCCTTCCCTCCACACCGACTATAACTATTTCAATTGATTCAAGGGTCCACCACCAGTTAG
>LE_HBa0077N09_SP6_18688 (trimmed for quality and cloning vector)
AAACTGAAATTAAAAAATGTTCTAGTTTCAAATCCATACCCTGCACTTAAAATGACAGATTTAAATCAGTAAGTCAATCAACTCAATATGAGAATAAACA
CACAATTGAAACTGATATATTAACGATCAGCTAAAATTGATATGTTATTATGTAATATTTTTTATTATAATGCAATATTTAATATTCACGATATATAAAG
CTCATCGAGAAAAACCGCTTTAAACTTCTTCAATTGGACACTCATCTTCAGAAATGTCGTGGAAGTTCCAAACAAGTACTTCCCAAAAAGGTCGTAATCT
ACTTCTAGAAATACCAATAACATGTCCACACATTTACCAGCTCTATCTATATAATAAAACCAAATAATCACCTTTTCTTCTATATATTATACCGTTTCGA
GTCATCCTTGTCTGCGCACGTGGGTTTATATCAAAAATTAAAAAATTTATACTTCATTATATTTGATATTTATTTTGAAATAGAATTAAAACAAAAGTTA
TATAAAAAAAAATCTCAATTTAATACTAATGAATTTCACATAAAAAATATAACTTTAAATTTAAAATTTCTAATTAAAAATAAAAAAATATTTTTCACTT
TGCTACGATTATTTTCTTGAATAATTGTATATAGTTCTCTTATCTATTAACCACATAACGTTTGCGGGTCTCCCAAGTATTTATCTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.893907
Expected error %
0.117321
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0077N09
Clone
Clone name
hba-77n9
LE_HBa0077N09
P077N09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found