Clone Read LE_HBa0077H15_SP6_18412

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0077H15_SP6_18412
Primer
SP6
ID from Seq. Facility
LE_HBa_077_H15-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
700 trimmed for vector and quality, 987 raw
Genbank Accession
Sequence
>LE_HBa0077H15_SP6_18412 (raw untrimmed)
AAAAAAAAGGGTTTTCTTTCAGCTAGTNCACGGGATACTTGGGACACGTCGCATACTTCAAAATATAGAAAATACTTAGTCTATTACAATATTTCAAATG
AAATAAAAGACATCTACATATGCCCTCGAGTCAATTGAGGACATACTTCAACTTGGCTTGAATGACTCTCGAATCCAAAATCTCCTTCACGATCCTTCTC
ACCTTTTGATGACCTACACCTTTAGAGATAACAAAATGTATGAATTAGTACAGTCACTTGTACTAAGCATGACATTATGCATAAAGTCATGAAAACGGAC
ATTTATCAGAAATATGCGTCTTTTTGACTTAAATATCATGACATAATCATAAGAACAACATTTAACACTTAGAAACACATAAGATAACATTTAAGAAATT
TATCACTTTTTTAACAAATATTACATTGAAGTACATCACTGTTACAGTGAACCTTTTTCACTGTACAGTGAAGTCCATCCAATTCACTTTAGACATTTCC
TATAACGTAGTTCCCTCACTAAAAGCTATCCTAAGCCTCACTTAAGTAAGACAAAGAGAGACCACCCATAAAACCTCTCTAGGCACACCTAATTGATCCT
TAAGACCACATATAATGAGATCAAAACACACTTACAAGACACCAATCACATGGACATGAGATCCTTAAATATCATGACATAATCATAAGAACAACATTTA
ACACTTAGAAACACATAAGATAACATTTAAGAAATTTATCACTTTTTTAACAAATATTACATTGAAGTACATCACTGTTACAGTGAACCTTTTCCCCTGT
ACAGTGAAGTCCACCAATTCACTTTAGACATTTCCTATAACGTAGTTCCCTTACTAAAAACTATCCAAGCCTCACTAAGTAAGAAAAAAAAAAACCCCCC
AACAACCTCCCTAGGCCCCCTTAATGATCCTTAAGACCCCTTAAATGAATCAAAAACCCTTACAAAAACCAATCCCTGGGAATGAAA
>LE_HBa0077H15_SP6_18412 (trimmed for quality and cloning vector)
ACTTGGGACACGTCGCATACTTCAAAATATAGAAAATACTTAGTCTATTACAATATTTCAAATGAAATAAAAGACATCTACATATGCCCTCGAGTCAATT
GAGGACATACTTCAACTTGGCTTGAATGACTCTCGAATCCAAAATCTCCTTCACGATCCTTCTCACCTTTTGATGACCTACACCTTTAGAGATAACAAAA
TGTATGAATTAGTACAGTCACTTGTACTAAGCATGACATTATGCATAAAGTCATGAAAACGGACATTTATCAGAAATATGCGTCTTTTTGACTTAAATAT
CATGACATAATCATAAGAACAACATTTAACACTTAGAAACACATAAGATAACATTTAAGAAATTTATCACTTTTTTAACAAATATTACATTGAAGTACAT
CACTGTTACAGTGAACCTTTTTCACTGTACAGTGAAGTCCATCCAATTCACTTTAGACATTTCCTATAACGTAGTTCCCTCACTAAAAGCTATCCTAAGC
CTCACTTAAGTAAGACAAAGAGAGACCACCCATAAAACCTCTCTAGGCACACCTAATTGATCCTTAAGACCACATATAATGAGATCAAAACACACTTACA
AGACACCAATCACATGGACATGAGATCCTTAAATATCATGACATAATCATAAGAACAACATTTAACACTTAGAAACACATAAGATAACATTTAAGAAATT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.926746
Expected error %
0.0701174
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0077H15
Clone
Clone name
hba-77h15
LE_HBa0077H15
C00HBa0077H15
P077H15
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found