Clone Read LE_HBa0077E16_SP6_18270

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0077E16_SP6_18270
Primer
SP6
ID from Seq. Facility
LE_HBa_077_E16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
745 trimmed for vector and quality, 1006 raw
Genbank Accession
Sequence
>LE_HBa0077E16_SP6_18270 (raw untrimmed)
AAAAAAAATGTTTTCCTTTAGGCTATTGAGAATATACCTATCTTTAGCTTTGGATTTAGTTTTTTGATTTTTGATTTTGATACAGTGCAATTCAATCTGA
ATCACAATAAATATAATTTGATTTGATTTTTTAAAAAATATTTGGTTATTTAGTTGCGTAAATAATTAAAAACATAATTAAAGATATGAGAAGTATTAAT
ATTAAATCTCTTACATATACTTTTTAAAAATTACAAGTAAAATGTAAAAAGCAATTTTGAATATCTAATTTTTTTGTTTAAAATATTAAATTAATATAAT
ATAATTTAATTTTAAAAATTAATCTAATTGACTTTCGAAAAACATAACATAACAAATAAAAGTGGATAGAATGAATACTTAAAAGTATATCAATTATAGA
TATCAAAACATAATGAATGATAATAACTAAAAAGTGACAAAAGTGGTTTATATATATAATTCGTTTTTTATTATTATTATTTTTCAAAATCCAAATCAAA
CCAAACAAAGTAAATTATAAAATTCAATATCGAATCAAAAAAGCAACACATTCCATTTTTACAAAACATGTTTAGACACAAGGATCCATGCCATTACAAC
ACATTCCATTTTTACATTCAAAAGCAAATTCTACTCTTATCATCGCACAGAAAGTTTGGAATTAACCAAAAAGCTTATCATCTCCACCCTTCACTGCTCC
CTGAAGCTGATCCATAAACATATGTGCCACTGATCTGTACCCCATCCTTCTAGCCTATTTTGTTCAAAGATCCAACAAGAAATGAGACAAATTCTCAGAG
CAAACTAAATAAACAGCAGAAACACCCGAACGAAACAAACCCTCAAGTGAAACTAGTGACAACTTGCAAACCTTTAATGTGTTCCCGGTAAAACTTTATT
TCCCTTTTTTAGGCAAAATGACCCAAAAAAACCCAAAAAATTTTGTTCCTGGAGCAGAAAAACCCCAATGAAGTTGGCCGTATCCATTTAAAAGAAGTTG
CCTCAC
>LE_HBa0077E16_SP6_18270 (trimmed for quality and cloning vector)
ATATACCTATCTTTAGCTTTGGATTTAGTTTTTTGATTTTTGATTTTGATACAGTGCAATTCAATCTGAATCACAATAAATATAATTTGATTTGATTTTT
TAAAAAATATTTGGTTATTTAGTTGCGTAAATAATTAAAAACATAATTAAAGATATGAGAAGTATTAATATTAAATCTCTTACATATACTTTTTAAAAAT
TACAAGTAAAATGTAAAAAGCAATTTTGAATATCTAATTTTTTTGTTTAAAATATTAAATTAATATAATATAATTTAATTTTAAAAATTAATCTAATTGA
CTTTCGAAAAACATAACATAACAAATAAAAGTGGATAGAATGAATACTTAAAAGTATATCAATTATAGATATCAAAACATAATGAATGATAATAACTAAA
AAGTGACAAAAGTGGTTTATATATATAATTCGTTTTTTATTATTATTATTTTTCAAAATCCAAATCAAACCAAACAAAGTAAATTATAAAATTCAATATC
GAATCAAAAAAGCAACACATTCCATTTTTACAAAACATGTTTAGACACAAGGATCCATGCCATTACAACACATTCCATTTTTACATTCAAAAGCAAATTC
TACTCTTATCATCGCACAGAAAGTTTGGAATTAACCAAAAAGCTTATCATCTCCACCCTTCACTGCTCCCTGAAGCTGATCCATAAACATATGTGCCACT
GATCTGTACCCCATCCTTCTAGCCTATTTTGTTCAAAGATCCAAC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.87937
Expected error %
0.215769
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0077E16
Clone
Clone name
hba-77e16
LE_HBa0077E16
P077E16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found