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Clone Read LE_HBa0077B13_SP6_18120

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0077B13_SP6_18120
Primer
SP6
ID from Seq. Facility
LE_HBa_077_B13-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
696 trimmed for vector and quality, 957 raw
Genbank Accession
Sequence
>LE_HBa0077B13_SP6_18120 (raw untrimmed)
AAAAAAAAATGTTTNCTTTTNCCTATGTGACNNANNNCNNCNTNATAAANTGTGAATTGCATGACCTTTATANGATTGATATGAATCACCTGTAATCATC
TTGGAGACATGGTGAATTTTCCAAAGAGCACCAAAGGAAATTTTTGATAATGTCCATGTTTTCTCATGTTGACTTGCATTTTAATGTGAGAATTGTGAAG
TTGAGTTCATGAGGTAAGACAAGGAACTTGGTAATAGTCACTTGTAGGGTAAATTGTTTAGCCTTGTAATGGAAGTTGAGTCTCTTTTACAATGAAATTT
GTTGACTCTCTTGAAAATTAAGTGACTTGATGATTTGGAATGCAAAATTTTAGGCTCATTCTTGAAAAGGTGAAAGCATGTTTAGCTAAGTGTCCATGTG
TGTGCCTATAATTTGTGTTATTTTTCAAAAATGAGGCTTACTGTAAGGGTGAGTATTTTGTTAAGAAATGAAGTTTGTGGAATGGCTTCCTATTTTGTTG
TGATGTACTTGGTGTGACTTGCCATTTAGACTTCACTAAGAAGAAAAATATATGCATGTCTTGTCTTGAAAGTTGAGATTTCTCATATTTAAAGAAATTG
ACCTTGAACTTTGCTAAGGTGTGAACTCATGATACATGCAAGTGTGTTGAGGAGCAATACATTCCTCTATGTACACCACTAAGCACGGTATGGTTGAGTA
TGACCTTCATGGTACTAGGTCTAACTAATGAAGATCTTTGTTATTTAACTAACTCAAATTTATGAGCCTTGAAGTATGGATTGCTTAATTACTTTGAGTA
AGGGTTATTATCTGCCTATAATTGGCTTTTTGAAGATTTCTTGTAAGGAATTAAAATTAATGATCTTGTTTGGTTAGGAAAAAGATGTCCCCCCTTGAAC
ACAAAAGGGCCGTTTTGTTTTATGCATAAAAGATGAGTGAAATGGATTTTACTTGAA
>LE_HBa0077B13_SP6_18120 (trimmed for quality and cloning vector)
TGTGAATTGCATGACCTTTATANGATTGATATGAATCACCTGTAATCATCTTGGAGACATGGTGAATTTTCCAAAGAGCACCAAAGGAAATTTTTGATAA
TGTCCATGTTTTCTCATGTTGACTTGCATTTTAATGTGAGAATTGTGAAGTTGAGTTCATGAGGTAAGACAAGGAACTTGGTAATAGTCACTTGTAGGGT
AAATTGTTTAGCCTTGTAATGGAAGTTGAGTCTCTTTTACAATGAAATTTGTTGACTCTCTTGAAAATTAAGTGACTTGATGATTTGGAATGCAAAATTT
TAGGCTCATTCTTGAAAAGGTGAAAGCATGTTTAGCTAAGTGTCCATGTGTGTGCCTATAATTTGTGTTATTTTTCAAAAATGAGGCTTACTGTAAGGGT
GAGTATTTTGTTAAGAAATGAAGTTTGTGGAATGGCTTCCTATTTTGTTGTGATGTACTTGGTGTGACTTGCCATTTAGACTTCACTAAGAAGAAAAATA
TATGCATGTCTTGTCTTGAAAGTTGAGATTTCTCATATTTAAAGAAATTGACCTTGAACTTTGCTAAGGTGTGAACTCATGATACATGCAAGTGTGTTGA
GGAGCAATACATTCCTCTATGTACACCACTAAGCACGGTATGGTTGAGTATGACCTTCATGGTACTAGGTCTAACTAATGAAGATCTTTGTTATTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.932066
Expected error %
0.947546
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0077B13
Clone
Clone name
hba-77b13
LE_HBa0077B13
P077B13
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found