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Clone Read LE_HBa0076N05_SP6_17912

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0076N05_SP6_17912
Primer
SP6
ID from Seq. Facility
LE_HBa_076_N05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
674 trimmed for vector and quality, 839 raw
Genbank Accession
DU035581
Sequence
>LE_HBa0076N05_SP6_17912 (raw untrimmed)
TTATTATGCAAATGGTAGCTGGAAATTGGGGAAGAAGAAGAAGAAAAATAAAATAAAATTTGATAAAATGACGTTTTCACGCGCGTCTAGTGAGTGTACC
ACACTTACTTTGCCATCTCAGCAAAAAGTGTCAAATTGACACATCGGGACATAATATAAGGTGTCTAAAATGAACAAAACTCAGTTAAGGTGTCTAACTA
AAAATTAGTGTCAACTTTAGGTGGCCACCGATGGATTTGACCTATAAGTAAATATGAATTTGCTAAAAAATGATTCACTTAAAAAGGTTGTAACTCACTT
TAATCTTCTAAAGCCAAAATATATTAAATCAAAATTAAATTGTTACTATCCTACTACCCACCGTATCTCTATATTATTATTTTTAAAAAAATAAATTTTC
ATTCAAAAGAAAGATTTTTTTTGCCATGTACCCCCACCCCCACGCCCCTGTCCCCCAACACCCCATCCCCATTAAAAAATTGTCAACCCTACCCCCACCC
CTAGGGGTGTAAATGAGCGAGTTGGTTCGGATTTTTCAAATATCAAATCAAACCATTTGTCTCAGATTTTTAAATGTATAAATCAAACCAAATAAATAAA
ACTCGGGTTTTTCAACTTCGGATTTTTTCGGGTTTTTTTTGGATTTTTTGGGTTTTTTTTGAATTTTTCAGATTTTTTCGATAAAGTTTTCATACAAACA
TATAATTTACTTGTACTTCAAATATTTCTTTAGTCCTACCAAAATGCAACTACCCGAGTTAATTTCTCAAGAAAAATAACAAAAAAATATTGATATGAAT
AATGAACCCTAAATATCCAAATAAAAAAAAAATAAATAA
>LE_HBa0076N05_SP6_17912 (trimmed for quality and cloning vector)
AGCTGGAAATTGGGGAAGAAGAAGAAGAAAAATAAAATAAAATTTGATAAAATGACGTTTTCACGCGCGTCTAGTGAGTGTACCACACTTACTTTGCCAT
CTCAGCAAAAAGTGTCAAATTGACACATCGGGACATAATATAAGGTGTCTAAAATGAACAAAACTCAGTTAAGGTGTCTAACTAAAAATTAGTGTCAACT
TTAGGTGGCCACCGATGGATTTGACCTATAAGTAAATATGAATTTGCTAAAAAATGATTCACTTAAAAAGGTTGTAACTCACTTTAATCTTCTAAAGCCA
AAATATATTAAATCAAAATTAAATTGTTACTATCCTACTACCCACCGTATCTCTATATTATTATTTTTAAAAAAATAAATTTTCATTCAAAAGAAAGATT
TTTTTTGCCATGTACCCCCACCCCCACGCCCCTGTCCCCCAACACCCCATCCCCATTAAAAAATTGTCAACCCTACCCCCACCCCTAGGGGTGTAAATGA
GCGAGTTGGTTCGGATTTTTCAAATATCAAATCAAACCATTTGTCTCAGATTTTTAAATGTATAAATCAAACCAAATAAATAAAACTCGGGTTTTTCAAC
TTCGGATTTTTTCGGGTTTTTTTTGGATTTTTTGGGTTTTTTTTGAATTTTTCAGATTTTTTCGATAAAGTTTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.932226
Expected error %
0.183633
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0076N05
Clone
Clone name
hba-76n5
LE_HBa0076N05
C06HBa0076N05
P076N05
Clone type
BAC
Contamination
none
Estimated length
94,871
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found