Clone Read LE_HBa0073M11_SP6_17108

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0073M11_SP6_17108
Primer
SP6
ID from Seq. Facility
LE_HBa_073_M11-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1243 raw
Sequence
>LE_HBa0073M11_SP6_17108 (raw untrimmed)
CAGAAGTACAAGATCCAAACACTAATATAGAGAGCGAGGGAGCCATCACCCCTTTCTTNTAGAGAAGAGTAGNTGTGTATGATNTGATAGATATTGATAT
TGAGAGTAGAGGAGTGTNTGATATATTTNAGTTNTNGATTTGTAATAGTATGTGGGATTATATGTAGGAGTGTGAGTATTAGATGTATAAGANTGAATGT
CTGCGCATATAGTGNTGAAANATNTATTGAATAATTATGATAATTGAGATGATAGATTATGTAATGTGTGAGGATGTGTGGAGTGGTGATTATAGTAGAT
ATANGATATGATGTAGTTTAAAGTGAGTGAGATATTGGTTGTGAGAAGATNGTTNATATGTATGTATTGATTGATTTGTTGATGTAAAGGTGATATATGT
GTTAGATAGAGTTTAAGTAGATAGAGGTAAGATTAAAGTGTATAAGATGGTGAAATAAGNTGATGAAGAGTAGAGGAGGTGAGGAAATAGAATTGAGTGA
TATNGGATGAGATTATGGTGTTNATNATGTTNTAGATGTGTGAGATNGTAGTGTGAGGTAGATATATGTGATGAGAGGANAGTGATTGAATAGAGAGNTA
TTGTAGAGANTGATATGAAGTAATAAGATGTTGGTGTGAATGTGTATGAATATAGTGTTGTTGTGTGTAGATGGGTGAAGAGTANAGAGGTGTGTGGTGT
GATGAGGAGATGTAGTGATAATAGTGTTGATGTATTAGGAAGAGAGTGTGGTGGGTGGGAGTTAGATAGTGATGTGTTAGGNAGGTGTATGTTGTGGGAG
ATGTGGATGTAGAATTGTAANATGTGAGGAGAAGAGTATGTGTGAGAGNTGTGTNTNTGATGATAGTAGGTGTGTGGANGATGGTGTGAGGATGAATAGA
GTGATTGTGTGTGATAAGGATGAATGAGTAGGGTGGNTGATAGGNGTGNGTGTAATTAAGTGAGAAGTGTGTGAGAATAGATTATATGNTAGAGAGTGGA
TATATGAGTAGTTAGATAATAGTAGATATAGTAATGGAGAGTATTAGATATGTGTGGATGATATAGTATTGTGTTGTGAGTAGTGGAGATGTGTAGTAAG
AGAGTGGTGTGGGTGGTTGGAGAGTGAGGTGTGAGTGTATTAGGATGTAGAAGTGTNAGATGTGAGATGAAGGTATGGATATAGGATAGTTTATGAGATG
TAGAGAAGAGAGAGAAAGAGAGAATGAGTGAGAAGATAAGAGT
>LE_HBa0073M11_SP6_17108 (trimmed for quality and cloning vector)
GT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
4.28712
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0073M11
Clone
Clone name
hba-73m11
LE_HBa0073M11
P073M11
Clone type
BAC
Contamination
none
Estimated length
110,205
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found