Clone Read LE_HBa0073F23_T7_16797

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0073F23_T7_16797
Primer
T7
ID from Seq. Facility
LE_HBa_073_F23-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 2384 raw
Sequence
>LE_HBa0073F23_T7_16797 (raw untrimmed)
CTGGGAGTTAGCGGCANACATGATGCGAGAAGTAGTATNGATGATGACGTACGATACGNGATGNAGTNGNGTNAGAGCAGTNAGTATANGCACACNAGAT
CCGATCGANGTGTNAGNGCTATGCGATGGAGCTGGTCAGNCGNCANTANGNACGCGCCATGNTACGCGNCTGCANTCTGCTACTAGTATGTATTNCGTAA
GTNGAGNCTNGNTACCNCAGCACNNCTNAGNCGTANGNCGCNTNTANNGTGACAGCCCCTGCAGCGTGATAGCGTACGAGTGAGCGAGTCCGACTNCANA
GNACAACNTNNGANTNNTGGNAANACAGTNCTNCGTGANAGTAGNTATAGTNCAGATNTAAAGTGNTAAAAGGAGGTGNCGTCACACGTCCCGCGATCTN
TCATNAGCATCAGCGGCATNGTNGNTGAGTANTATNGCTNNTGACNATGGNCNATNCANTGNCACTGGCATCGTANGTAANTGACTNGCNCAAANCGACT
AGTANCNTCTNGTAGCCATCCGCGACTTCGCCATTCGTAGCNACACTNATNATANAGGGNCGTACTANAATNGNAGATGANATGATGATAANCACGATGG
GNTNATNAGAGGACTATTCACGCCACATNGCNCACTGCTNCTGAAAGTCTNGCAACAACACATAACGACAGNAAGACANCGNCCACCATGACTGCTAGCT
GAATNCAGCACGCNNTGATATCNTGTGACGTGNCNATGGCTAGTACTGNTANCGGGNCNCTNACTACTGACGNGTAAANGTNGACTANGACTGCATGNAC
TGCCNNCTGCACTCCGTGAGCGNGTGANCGACAGNGGATTCGNATCGNCGNCTTTAGNNACAGCTCAGCGCTNCCNCANACNAGCGCTAGTACGAAGCAT
GAGGNACACAAAGCAACCTGNTANTAGCGCTACGCTANCTAGCTNAGTGNNTGACGTGAGTNNTGTAACNTGANCGTGNCNATNACNCNACNCGGGCTAA
TGACCATCAGTACNTGACATTGNATTGAGCTCGAGGNCNGATGTGTNCTCGCNGCNCTTCACGANCNCNCNATNGACACGCTNGNCGGTNCNGATNCGTC
NGCCATNCNGCTNCANGCTNGCGCNGACTNCNCNCNCNGCATNCGGGCTCACACGNTCGCGCTGATAGCNCGCGNANCATNGCNCGACATAGCTGCACGG
GNCGCGNCGCACGANCGCNAATATANCCNNGTGACACCACGAGCATGATGCGCTTNCNCGTGCNTGANGNTGCGANGCCCAGCANCGCGACCATNACTGA
NANAGCCCGACCGGCGGTCGCCTACTACTATCTGCNTGTNCGTGTGCGTACACGCAAACTCANTANGTNGCACTGACAGTCCACTGACGACGCTGCATGT
GCANAGTGATNATNAGACTGACTGATNCNGCTGCAACGTGCGACACGCNACTNATACAAAGCGNATTTAGTCACANCATGGCCCCAACNNCTGCANGCAT
ACTGANACGACAGCGAGCGTGANGACATNCGACGCTNANACAGCGANTCGATNTGCACTGATGCGTATACNAGTGTGATCACGTGTCGCTGCACATGTGA
TGCTTANANGACTGTCAATNCTCGATGCGTTCNCATNCTCTGACTTGCGAGACAGTAGNGNTCATANCTCTATACTNACTACATCGATNANTNANCGTGC
AACTGCTTCTGTAACNCNGACNCTGATGATCTATGGCACATACTACATGCGAGACGTAGCATCCTGCNCATGTATGGGTGCGACGCACTGTCGANTNCNN
TCGATGCCGANCTGTCNAGCNAGTGCTGCAGTGACTNTATGGTGAGCNGCACGCAANTGACGCAATCGCGCGTGCGTGCACACGACTGATGACTCTGTGA
TGANAGCGCTGCTTNGATGTGACCGTNGATAAANCACTGCGTAGTCGAAGGGACATTNACAGCNATGTGTCGGTNACTGTATCTGTGCATTGTNGTCATC
GATATGACNAACGATTGATCTAGCGCTCTGTGGCGTGCCATGTNNGTACTGCTGCTTACTNGATGCTCGACATACTGTANGACTGCCGATACGATCTACT
ACTGATNCATCATATCGCTGCCCGACTAACGTGTATGCGACGGCTGGCGTGCGCGCGCGTGGATCTGACACANCTCCATNACTGCCAATNCATGATGATG
ATCAAGTACTGACANGCATGTGTCGCTGTCTNGTNCACAGAACATCTGTGACATGATGATACGCGNTACGTGGATGTGGNCATGTCACATATTGTCTGCA
TTNAACTGACTTGCGACNACGCGNCTGCTCTGTACTGCGCTATGGAAGCGTGGNCGATGCNCGAGTTGTAGCGANTNAGTGCGA
>LE_HBa0073F23_T7_16797 (trimmed for quality and cloning vector)
GT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.3129
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0073F23
Clone
Clone name
hba-73f23
LE_HBa0073F23
P073F23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found