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Clone Read LE_HBa0073B21_T7_16601

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0073B21_T7_16601
Primer
T7
ID from Seq. Facility
LE_HBa_073_B21-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
637 trimmed for vector and quality, 786 raw
Genbank Accession
DU034512
Sequence
>LE_HBa0073B21_T7_16601 (raw untrimmed)
TCGTTAACCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTGGAAGTTGTGGGTGATGGTCCCCCTAGCATCCTGGATGAAGTAAGTGCATT
AGCCAAGCTGTTCCCTAACATTGTAACAAGTTACAATGCTTTGCTCAGTGCACTTGTTCTTTCTCCTGCTATTTTCTGATTTCAGACCTTTGAGGGGAAC
AATGGATATATAGCTCCTTCTTATAGTGATGAATCTTATGATGGTGAACCGTCATCAGGGAACAGGTTCAGGATGAAACTTAAGGAATTCCACAAGAGGT
AATGTTCTTATGTTTGTGGAGCAATGTTAAGTGTTGGGCGATTTAAATCTTGGTCTCTAAATGTTTTTTTTCGTTTTCCACCCAGTGTCCAGTACCTACA
TTGTCCTCCTTAATGTTATTAATTCATCCCAGCTAACTAGCTAACTGGATAGACACTTCTGCGAGACACAGGTTGTCTCATCTTTTAATGCATTTAATTG
TTTTCTCCAGTACTACTTCGTTCTCAGCATTGGACAAAAACTACCTCACTCCATTCTTTACTACTCAAGGTGGAGACGAAGATGAAGGTAATTCTTTCTA
CCTGCTAGTTACCATTTACCTACATTGCTTGTTGTGCTCCTTTATATTGTCTAATCATTTATACAGTTGCGAACTTGATAATCTCATGCCCTATGACTTG
TTTTTTTCTGATACATAGAGGAGCCAATTATGCCAAGCTCCCAAAAAGCTGGGTATGACCGGCCACTGATTTTCAAATAACCCAAA
>LE_HBa0073B21_T7_16601 (trimmed for quality and cloning vector)
AGCTTTGGAAGTTGTGGGTGATGGTCCCCCTAGCATCCTGGATGAAGTAAGTGCATTAGCCAAGCTGTTCCCTAACATTGTAACAAGTTACAATGCTTTG
CTCAGTGCACTTGTTCTTTCTCCTGCTATTTTCTGATTTCAGACCTTTGAGGGGAACAATGGATATATAGCTCCTTCTTATAGTGATGAATCTTATGATG
GTGAACCGTCATCAGGGAACAGGTTCAGGATGAAACTTAAGGAATTCCACAAGAGGTAATGTTCTTATGTTTGTGGAGCAATGTTAAGTGTTGGGCGATT
TAAATCTTGGTCTCTAAATGTTTTTTTTCGTTTTCCACCCAGTGTCCAGTACCTACATTGTCCTCCTTAATGTTATTAATTCATCCCAGCTAACTAGCTA
ACTGGATAGACACTTCTGCGAGACACAGGTTGTCTCATCTTTTAATGCATTTAATTGTTTTCTCCAGTACTACTTCGTTCTCAGCATTGGACAAAAACTA
CCTCACTCCATTCTTTACTACTCAAGGTGGAGACGAAGATGAAGGTAATTCTTTCTACCTGCTAGTTACCATTTACCTACATTGCTTGTTGTGCTCCTTT
ATATTGTCTAATCATTTATACAGTTGCGAACTTGATA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.968646
Expected error %
1.20133
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
emb|CAC83608.1| Score 83 E Value 6e-15 Identity 17.60% Align. Length 266bp (41.76%) Frame 3
Na+/H+ antiporter, isoform 2 [Lycopersicon esculentum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0073B21
Clone
Clone name
hba-73b21
LE_HBa0073B21
P073B21
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found