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Clone Read LE_HBa0071I23_T7_16173

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0071I23_T7_16173
Primer
T7
ID from Seq. Facility
LE_HBa_071_I23-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
716 trimmed for vector and quality, 760 raw
Genbank Accession
DU034154
Sequence
>LE_HBa0071I23_T7_16173 (raw untrimmed)
CTTGGGTCCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTATACCTGAGAGATTTGACCATACCTCTGTGGATTTTATGGGGAATAACTT
TGAGTATCTTCCTTTCGGTGCCGGAAGAAGAATGTGTCCTGGAATGTCATTTGGTTTGATCAATGTTTATCTTCCGCTAGCTAAATTGTTGTATCATTTT
GATTGGAAATTACCTCATGGTTTGAAGCCTAAGGATGTGGACATGACTGAACTTTCTGGAGTAACTGCAGCAAGAAAGACCGAGATCTACTTGATTGCCA
CTCCTTATTATCCTTCTCGTGAATGAAATTTGATGCAAGTTCCTATGTTGCACGGACTTTTCAAAAATTTCTGAAGGTACGACATTATTTTTGGAGAGTC
GGATCAACATAGAATTCAACAGTGAGGTTTATTTTTGTTGTTGATCTTTATCTGTTTCTGTTGTTGTGTAAATTATGTATTTGATTACGAGTGGAGGTGC
CAAAATAAAGAAAAGACCAAAAAAAAAAGTATAATCAAATGTTCTTAAAATTAATATTACTGAGGATACGAGTATGATGCTGCTGACAAATTAACATGAG
TAATGTATATATAGCTCGTAGTTAATTCCAAATAAAACCAGATATTTTAGCAGCCGACACTGCATCGGCAAATAGATTTTGTCATGCAAATATGTGGCAG
GACGTGAAGATCCATTAATCAATAGGAAATCGTCTTGGAGGCTCTACGTGTGGCTGGAAA
>LE_HBa0071I23_T7_16173 (trimmed for quality and cloning vector)
AGCTTTATACCTGAGAGATTTGACCATACCTCTGTGGATTTTATGGGGAATAACTTTGAGTATCTTCCTTTCGGTGCCGGAAGAAGAATGTGTCCTGGAA
TGTCATTTGGTTTGATCAATGTTTATCTTCCGCTAGCTAAATTGTTGTATCATTTTGATTGGAAATTACCTCATGGTTTGAAGCCTAAGGATGTGGACAT
GACTGAACTTTCTGGAGTAACTGCAGCAAGAAAGACCGAGATCTACTTGATTGCCACTCCTTATTATCCTTCTCGTGAATGAAATTTGATGCAAGTTCCT
ATGTTGCACGGACTTTTCAAAAATTTCTGAAGGTACGACATTATTTTTGGAGAGTCGGATCAACATAGAATTCAACAGTGAGGTTTATTTTTGTTGTTGA
TCTTTATCTGTTTCTGTTGTTGTGTAAATTATGTATTTGATTACGAGTGGAGGTGCCAAAATAAAGAAAAGACCAAAAAAAAAAGTATAATCAAATGTTC
TTAAAATTAATATTACTGAGGATACGAGTATGATGCTGCTGACAAATTAACATGAGTAATGTATATATAGCTCGTAGTTAATTCCAAATAAAACCAGATA
TTTTAGCAGCCGACACTGCATCGGCAAATAGATTTTGTCATGCAAATATGTGGCAGGACGTGAAGATCCATTAATCAATAGGAAATCGTCTTGGAGGCTC
TACGTGTGGCTGGAAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.957354
Expected error %
0.325793
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At3g26330.1 Score 103 E Value 9e-23 Identity 17.60% Align. Length 260bp (36.31%) Frame 2
68416.m03285 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At3g26300.1 Score 101 E Value 4e-22 Identity 17.20% Align. Length 260bp (36.31%) Frame 2
68416.m03282 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAK62342.1| Score 155 E Value 1e-36 Identity 24.70% Align. Length 278bp (38.83%) Frame 2
elicitor-inducible cytochrome P450 [Nicotiana tabacum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAK62343.2| Score 154 E Value 2e-36 Identity 24.40% Align. Length 278bp (38.83%) Frame 2
elicitor-inducible cytochrome P450 [Nicotiana tabacum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0071I23
Clone
Clone name
hba-71i23
LE_HBa0071I23
P071I23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found