Clone Read LE_HBa0070K13_T7_15481

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0070K13_T7_15481
Primer
T7
ID from Seq. Facility
LE_HBa_070_K13-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
665 trimmed for vector and quality, 730 raw
Genbank Accession
DU033608
Sequence
>LE_HBa0070K13_T7_15481 (raw untrimmed)
ACTCGGAACCCGGGGAACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCTAGACGCCCTTTGTCTAGAGAGGTTCAGACTCTAGCTAATGACTTCATGA
GATTAGAAGTAAATGAGAAGGGAGGATTGTTGGCTAGTGTGGAGTCAAGATCTTCTTTTCTTGACAAAATTAAGGAAAAACAGTTTGATGATGAGAAACT
AAGGCGAATCCAAGATAAAGTATTGCGAGGGGAGGCTAAGGAAGCACAAATCGATGAGGAAGGTGTTTTGAGAATCAAGGGAAGGGTATGTGTACCCTGC
GTCGATGGTTTGATCAACACTATTCTGACAGAGAATGCCCATTCCGGAATGGAAGTGGGAAAGAATTGCAATGGATTTTGTGGTTGGTCTTCTAAGGACA
ATGGGTAAGTATGACTCCATTTGGGTGATTGTTGATAGGTTAACTAAATCTGCTCATTTCATTCCGGTAAAGGTGACTTACAATGCAGAGAAGTTAGCCA
AGATCTATATCTCAGAAACCGTTCGATTACATGGGGTTCCACTATCCATCATATCAGATAGAGGTACGCAGTTTACTTCTAAGTTTTGGAAAACATTGCA
TGCGAAATTGGGTACTAGGTTGGACCTTAGTACTGCGTTCCATCCTCAGACCGATGGTCAAGTCTGAGAGAACGATTCAAGTGTTGGAAGATATGCTTCG
TGCATGTGTGATATAATTTGGGGGGCATTG
>LE_HBa0070K13_T7_15481 (trimmed for quality and cloning vector)
AGCTTCTAGACGCCCTTTGTCTAGAGAGGTTCAGACTCTAGCTAATGACTTCATGAGATTAGAAGTAAATGAGAAGGGAGGATTGTTGGCTAGTGTGGAG
TCAAGATCTTCTTTTCTTGACAAAATTAAGGAAAAACAGTTTGATGATGAGAAACTAAGGCGAATCCAAGATAAAGTATTGCGAGGGGAGGCTAAGGAAG
CACAAATCGATGAGGAAGGTGTTTTGAGAATCAAGGGAAGGGTATGTGTACCCTGCGTCGATGGTTTGATCAACACTATTCTGACAGAGAATGCCCATTC
CGGAATGGAAGTGGGAAAGAATTGCAATGGATTTTGTGGTTGGTCTTCTAAGGACAATGGGTAAGTATGACTCCATTTGGGTGATTGTTGATAGGTTAAC
TAAATCTGCTCATTTCATTCCGGTAAAGGTGACTTACAATGCAGAGAAGTTAGCCAAGATCTATATCTCAGAAACCGTTCGATTACATGGGGTTCCACTA
TCCATCATATCAGATAGAGGTACGCAGTTTACTTCTAAGTTTTGGAAAACATTGCATGCGAAATTGGGTACTAGGTTGGACCTTAGTACTGCGTTCCATC
CTCAGACCGATGGTCAAGTCTGAGAGAACGATTCAAGTGTTGGAAGATATGCTTCGTGCATGTGT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.967169
Expected error %
0.405084
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38745.1| Score 180 E Value 3e-44 Identity 74.80% Align. Length 606bp (91.13%) Frame 3
putative polyprotein, 3'-partial [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT66771.1| Score 178 E Value 1e-43 Identity 74.80% Align. Length 606bp (91.13%) Frame 3
putative polyprotein [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0070K13
Clone
Clone name
hba-70k13
LE_HBa0070K13
P070K13
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found