Clone Read LE_HBa0169P18_T7_14406

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0169P18_T7_14406
Primer
T7
ID from Seq. Facility
LE_HBa_169_P18-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1525 raw
Sequence
>LE_HBa0169P18_T7_14406 (raw untrimmed)
ACACGATATCCGGCTCGCTCAATCACACTACACGCAGCCGGGGGCAGCGAAGCGCATCCACAGGAGAGACAGCACAGCACGCGCCGCACATGAGACTGTC
GGCACACGCCGNCCACTACTCTACCGTCCTACAGGCGCACACGTCTCGCACACCCTGTTATTCGCACGTCTACACCGCGAANTCTCCTCCTCCACGCAGA
CATACGGCTCTGCACACGCGAGGACAAGCCACACCTCTTCTGTGAGAGGNACTNAGCCGCCGACAAGCNCAGCCCANAGAAAGAGGGGCAGACAAGNGCT
CCGCCAGACTNCTACTCTGCTGCAGTCAGAAACAGACATAGAGCTACAGATACAACACACCTTGAGGGAGCGCAAGAGCGCGCTATACCACCNNCGCGTA
ACATACACCGCACCATACACTGCTCNNTAGCAGGCGACTCCTGCCACACATGCGCAGCGCNGAGTGCCCGCACATTAANATGAGATAAACACTGCACGNC
TCACACACTGCTAGATTATAGTNACATCGCACACACGACATAACTGAGCAGCCTCCACACTAAACCAGTNGAAAACAATCATGTAGTCATGTCNGTGCGT
CGTCGTACACACCCACACTACCGCTCACTCACTACGCGCTTCAACACTCTCAATGCGTGCCCACACACCACCAANACTCGACGCGCGCACGGACCGCCAC
TGAATGACGACTGCTGTTCGACTCGCCAATGTGTGCACACGTCAGCTCACTCTACTCGTAATATACTCACGAGTGACTCTCAGACACACGCTGCAACAAC
TCGAAACCGTACGATTCACAGATACAACCGATCGTAGCTTCACAACGACATATCACCCCTCACTTACCATCACACACGCTCGAGAGCAGAGTNACGCACA
CGCCGCTACAGACACCGACACTACACGCGACGACACCCGACTCTAAACATCCAGTAACTGAACCCGCAGAACCCATCATTTCATCCGACGCGCCTGCCGT
CTACCTCACCCGCGCCTACTCGTTCACTTACTCAACTCCATGCAAGCGGGAGATGCGCCTGCTCGCCCTGCAACAGCACTCAGCAGTCCTGTCTGCCTCG
TCAACATCTCACTCTNCCGGTGCGAATATAGACGTTGAAGCACTCCCGCAGGCCCTATATCACTCGATCACTACGTGGATGTACACGTACTACTCCCACG
TCTCCACCTCTCACTAANTCCTCCTGACATCACGCCTGTTGCTCCTTCGCACCCTCGTCGTACTGCAACTCCACCTCTCTCCGATCACCACAAGAAGGCG
TCGCGAAACCCACGCACACAGCGACAGATAGCAACGGAGCACACACTCGAAGGCTACCCCGTCTAGGCGCACAACGACATGCCGACGCCCTCGGCGACTG
ACTCAGCAACCGTGGCTGGCCTACGCCGACCTACCGCCTTCACCAATGCCTGTGCTCATGCCCATGNACACACCGCATCGCCTCTTACCACGCTTAACTT
ATTCTATACATNAATTTGCTCCCTA
>LE_HBa0169P18_T7_14406 (trimmed for quality and cloning vector)
AC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.82141
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0169P18
Clone
Clone name
hba-169p18
LE_HBa0169P18
P169P18
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found