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Clone Read LE_HBa0036O23_SP6_142401

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0036O23_SP6_142401
Primer
SP6
ID from Seq. Facility
LE_HBa_036_O23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
62 trimmed for vector and quality, 769 raw
Sequence
>LE_HBa0036O23_SP6_142401 (raw untrimmed)
CCCACAGAAAAGATAATGGCGCTTATACTAAAAGTTCATTTCCTAAAATTCACCCAATTTCCATTGTGGGTTTTCCAATTCTAATAGGGGTTTCTTCTAA
ACTTCAAATTTGAGGGTTGATTATGATTGATTGTGAATTCTTACGATTAATTAAGTGTAGATTGTT
GGTTAATTGATGCAATTTCATATAGATCATGTTC
GTTTTCCAATTTATCCAAATCTTGGATCTTGTTTATGAATTGATGAAAATTGGAGAATGTATTGGTTGCTAGACCTGCCTCATCCCTAGCAATTCATTCA
TGGACTACCTATGGTATCGCGTTTTAGGATTGAATCTATCTCATGAACAGTTCACGATGAACCTTAGTCGCTGACACCTCACCCCAGTTTATGAATTGCC
CTGTAGGTATAGACTCATGAGGCTATCGACTTAGGCGTTACGTCTATTCCTCATGAGTAGACGGCCCAGAACACACATGGAGCTGAGGTGGATTTCGGAT
GGGGACCCAGAGCTGATGTCGTGCGAAGCGTTCTTGGACCTCTGAATATGTTGACTTCATTCATCTAGTCTTACCTCTATTTTCCCATTTCTCCTTGAAC
TCTATTTTACTTAGATTCCCTACTCAGCTCTCTCGCCTTAATATTTTTAATTGTTGTGTTGTTTTCCTTTGATATTTATTATTTCTCTCTTTCCTCTCTT
TTCACCTTGTTTTCTTTTTATTTGCTACGTGTCAATTAATGTGCATGCACTCTCCTCATGTCTTTTTCA
>LE_HBa0036O23_SP6_142401 (trimmed for quality and cloning vector)
GGTTAATTGATGCAATTTCATATAGATCATGTTCGTTTTCCAATTTATCCAAATCTTGGATC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.845573
Expected error %
1.2484
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0036O23
Clone
Clone name
hba-36o23
LE_HBa0036O23
P036O23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found