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Clone Read LE_HBa0032C06_T7_140256

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0032C06_T7_140256
Primer
T7
ID from Seq. Facility
LE_HBa_032_C06-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
565 trimmed for vector and quality, 903 raw
Genbank Accession
DU041657
Sequence
>LE_HBa0032C06_T7_140256 (raw untrimmed)
CGCGGGGGATCCTCTAGTAGTCGACCTGCAGGCATGCAAGCTTCCCTGATCTCATCCCCGGCATCATCCTGGAATCATCATTTACAACAGAAAAACCATT
GAATGATCAGATTGGCAATGATCAAAGCAATACGGCACATATTATTTGACATGCTAGTATTTCACATATCACCCTAGTCCATATCCTAGGTTGCACACAA
AGGTCATGGCCTTCCTGACAAATCTTTTCCTCGTGTCCATGACCAGGAGAAGGTAAGTATACACTAACGAAAGCTGCTGTTTGGATGGATATGCATTTCA
CAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTCTTACCGAGGTATCAAAAGTCCAAAGTGTGAGATTGTCTCGGAGAAGCTGCATAATCAATGTACT
GTCCCTGTAAGATTCCTCACCCAGTGCATCCAGCTCTGCGATGGCATCTTCAAAGGCCTGATACGAATAATCAGCTGTATATTGAGTTTGCATTTTCTTG
CTTTTTTCTTTTCTTTTTATTATAGAGTTTTGCAGGCTCCAAAACTACATACCACTCACAGACTGGACGGACAGTAAGAATGGGAGAAAAACTACACCTA
AAAAGTACTAACTTCCTCACTATTATTTTATAAACATAGAAAGGGGCAAAAATACCAAATAGGCTCTACTAAACTTTGCTCCTCGAGAAAACACTATTTT
TATAACTCCTTGCTCTCTTAACGCCCCCATAAAATGGGGGAAAAATAATGCCGAAATATATGAAAAGCCCTCCTTTCCGATCCATAACAAATTATCTATA
TAAAAATATTTCTGTCCCCGAAATTCAAAAATACCCACTCCCCCTTCCCTCCTCTTAACAATATAAAAAACCTCTCGGCCTTATTTTAAAGCTATTCCCG
CTA
>LE_HBa0032C06_T7_140256 (trimmed for quality and cloning vector)
AGCTTCCCTGATCTCATCCCCGGCATCATCCTGGAATCATCATTTACAACAGAAAAACCATTGAATGATCAGATTGGCAATGATCAAAGCAATACGGCAC
ATATTATTTGACATGCTAGTATTTCACATATCACCCTAGTCCATATCCTAGGTTGCACACAAAGGTCATGGCCTTCCTGACAAATCTTTTCCTCGTGTCC
ATGACCAGGAGAAGGTAAGTATACACTAACGAAAGCTGCTGTTTGGATGGATATGCATTTCACAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTCTT
ACCGAGGTATCAAAAGTCCAAAGTGTGAGATTGTCTCGGAGAAGCTGCATAATCAATGTACTGTCCCTGTAAGATTCCTCACCCAGTGCATCCAGCTCTG
CGATGGCATCTTCAAAGGCCTGATACGAATAATCAGCTGTATATTGAGTTTGCATTTTCTTGCTTTTTTCTTTTCTTTTTATTATAGAGTTTTGCAGGCT
CCAAAACTACATACCACTCACAGACTGGACGGACAGTAAGAATGGGAGAAAAACTACACCTAAAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.974643
Expected error %
1.8071
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At5g38480.1 Score 72 E Value 3e-13 Identity 29.80% Align. Length 113bp (20.00%) Frame 1
68418.m04651 14-3-3 protein GF14 psi (GRF3) (RCI1) identical to 14-3-3 protein GF14 psi GI:1168200, SP:P42644
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At5g65430.2 Score 71 E Value 3e-13 Identity 29.80% Align. Length 113bp (20.00%) Frame 1
68418.m08229 14-3-3 protein GF14 kappa (GRF8) identical to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from [Arabidopsis thaliana]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAC49894.1| Score 75 E Value 8e-13 Identity 29.30% Align. Length 122bp (21.59%) Frame 1
14-3-3 isoform e [Nicotiana tabacum] pir||T04129 14-3-3 protein, isoform e - common tobacco sp|O49997|143E_TOBAC 14-3-3-LIKE PROTEIN E
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
emb|CAA66309.1| Score 74 E Value 2e-12 Identity 29.20% Align. Length 119bp (21.06%) Frame 1
14-3-3 protein [Solanum tuberosum] sp|Q41418|1433_SOLTU 14-3-3-LIKE PROTEIN
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0032C06
Clone
Clone name
hba-32c6
LE_HBa0032C06
P032C06
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found