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Clone Read LE_HBa0031J21_T7_139854

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0031J21_T7_139854
Primer
T7
ID from Seq. Facility
LE_HBa_031_J21-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
641 trimmed for vector and quality, 909 raw
Genbank Accession
DU048535
Sequence
>LE_HBa0031J21_T7_139854 (raw untrimmed)
TCAGCCGTGGTCCCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCAGGCATATCATAGACTCTGTCCTTCAAGGACTTCTCGTTGGAGCAT
TTGCAGCTGAATAGATGCAACATTATGCAAAATAATTATCCCATGAACTCTAAGTTCACGTTTTATTTTAACGAGGATTTAGATAATTCATAATTAACCT
CGTAAATAATTTTCAACTGTCAATCATCTCTCCCCCTAATTTTAGGAAATTTAACATTCATCCCAATCTTATTTGAAAATTCATCTCTGTGTGTGGTGGA
GAAATTAATATCATAGGCGCACATTCAAACTTTAGATGAAATTATTTTGTTCATGACCATGAACAATTATGATGGGAAAACCTTTTTGCATGCATACATG
TTAAATAAATTTATGTCATACCAAATCTTATTTGGGAGTTTTGCTCTCATACCCATGTTTTAGCTATAATTGTAGCATACGATTTCTTCTAAACCAACTA
GCATTATAAGTATAATTTCATAGTGGAATTGTGCTCTTAATTTAACAATCGAGCAAACAACCTTACAAACATCAATTTGTAAGTTGACAACAAAGCATAT
GTGACCATCCCATATATGCATCTATCATATTAATTGCAAACGGTCCATATGACTAGTGAACATGTCCATATTCACCTTTTTATATGTTTCACAATTTTCA
GGCGATTACTATTCCAACCTTTAGCTGGTCTAATGATAATTTTCTCCAGAGATTTCTTGGAAGAACAATTTATATCGTCTTCTATTATTCCCTTGATTTC
TTAATTTCTTTTGTCTCTTTTTTAATTTAAAAGGGTCAACCGGCTTTGTCATGATAATTATTTTTTTATCTTACTATTTTTATTTGTTGTGTTTTCTCAT
CCTAGCAAT
>LE_HBa0031J21_T7_139854 (trimmed for quality and cloning vector)
AGCTTCAGGCATATCATAGACTCTGTCCTTCAAGGACTTCTCGTTGGAGCATTTGCAGCTGAATAGATGCAACATTATGCAAAATAATTATCCCATGAAC
TCTAAGTTCACGTTTTATTTTAACGAGGATTTAGATAATTCATAATTAACCTCGTAAATAATTTTCAACTGTCAATCATCTCTCCCCCTAATTTTAGGAA
ATTTAACATTCATCCCAATCTTATTTGAAAATTCATCTCTGTGTGTGGTGGAGAAATTAATATCATAGGCGCACATTCAAACTTTAGATGAAATTATTTT
GTTCATGACCATGAACAATTATGATGGGAAAACCTTTTTGCATGCATACATGTTAAATAAATTTATGTCATACCAAATCTTATTTGGGAGTTTTGCTCTC
ATACCCATGTTTTAGCTATAATTGTAGCATACGATTTCTTCTAAACCAACTAGCATTATAAGTATAATTTCATAGTGGAATTGTGCTCTTAATTTAACAA
TCGAGCAAACAACCTTACAAACATCAATTTGTAAGTTGACAACAAAGCATATGTGACCATCCCATATATGCATCTATCATATTAATTGCAAACGGTCCAT
ATGACTAGTGAACATGTCCATATTCACCTTTTTATATGTTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.939185
Expected error %
0.5918
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0031J21
Clone
Clone name
hba-31j21
LE_HBa0031J21
P031J21
Clone type
BAC
Contamination
none
Estimated length
125,632
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found