Clone Read LE_HBa0030I18_SP6_139031

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0030I18_SP6_139031
Primer
SP6
ID from Seq. Facility
LE_HBa_030_I18-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
660 trimmed for vector and quality, 859 raw
Genbank Accession
Sequence
>LE_HBa0030I18_SP6_139031 (raw untrimmed)
AATTTATATTTTATCCTNCTANGGTAATCATTTTTGAGGTCCATTCTTTTATAATGAACTTTAATAATTACCGTATCTCAACAAGTAATGTCATTTAGTC
ATTAAGGGTAAAAAGAGGATGCTAAAATAAGATACTTCCAAAAAAAGAGGACGTCATACTTTTAGGGGCATACTACAAAGGAAAGTCACACATAAAATGG
AATATAGCAACTAATGAAGATCAAATCCACAACGAGAGTGCCAATCCATAAAAGTCTCTCTTGATAGTTAACAATCATAAGTCTAGCTTCTAAGAGCAGT
AACTCTGTGTCTCTTAAGAAACAGAGAGTTAAAGCCAACGTTATCTTTGGTGTGTTCTCTATCAATTGCATATTTTTGTGTTTGTGACGCCCAACTTTCT
ATTTGTTTTTGTGTTCCATCTCTATGATTGCCTTGCTAGGATTTGTTATGAGTACAGTTCTCTTTTCCAGTAAAACCTAGTAAGAATAATATCCATCTTT
GATCAGTATAGTAGAGAATTCGCCAATTCGGCGTGTTTCACCTGTCTTCGACCAGACTTTGACCTTGGCATGTTAAGATCAATATCCAAATAGCCTCTGT
AGCATCACCAATTTGTCAAAACATATTCAGACATCACTGATGGATTGGCAAACCCACCAGACTCACCACCAATACATTATTTTTTCTTCTCACAATGCAG
CAACCAGCTTTTAATGACCATTGGTTAAGCATTAAGAAGGTGTTACCTATCCCCTGGTGACATATCCGTGACAGGATTAGCTTCCTTGACGGCAACAAAT
TGCACAGAGCTTTGCCGAAATAGGGCACCACCACCCCTACAAAAACTCTCTAACCAAGC
>LE_HBa0030I18_SP6_139031 (trimmed for quality and cloning vector)
TCCATTCTTTTATAATGAACTTTAATAATTACCGTATCTCAACAAGTAATGTCATTTAGTCATTAAGGGTAAAAAGAGGATGCTAAAATAAGATACTTCC
AAAAAAAGAGGACGTCATACTTTTAGGGGCATACTACAAAGGAAAGTCACACATAAAATGGAATATAGCAACTAATGAAGATCAAATCCACAACGAGAGT
GCCAATCCATAAAAGTCTCTCTTGATAGTTAACAATCATAAGTCTAGCTTCTAAGAGCAGTAACTCTGTGTCTCTTAAGAAACAGAGAGTTAAAGCCAAC
GTTATCTTTGGTGTGTTCTCTATCAATTGCATATTTTTGTGTTTGTGACGCCCAACTTTCTATTTGTTTTTGTGTTCCATCTCTATGATTGCCTTGCTAG
GATTTGTTATGAGTACAGTTCTCTTTTCCAGTAAAACCTAGTAAGAATAATATCCATCTTTGATCAGTATAGTAGAGAATTCGCCAATTCGGCGTGTTTC
ACCTGTCTTCGACCAGACTTTGACCTTGGCATGTTAAGATCAATATCCAAATAGCCTCTGTAGCATCACCAATTTGTCAAAACATATTCAGACATCACTG
ATGGATTGGCAAACCCACCAGACTCACCACCAATACATTATTTTTTCTTCTCACAATGCA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.958282
Expected error %
0.1705
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0030I18
Clone
Clone name
hba-30i18
LE_HBa0030I18
C02HBa0030I18
P030I18
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found