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Clone Read LE_HBa0026M05_T7_136894

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0026M05_T7_136894
Primer
T7
ID from Seq. Facility
LE_HBa_026_M05-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
53 trimmed for vector and quality, 810 raw
Sequence
>LE_HBa0026M05_T7_136894 (raw untrimmed)
ATTTCTCTTTTATCGTGACCATAATCTCTGTGTCTGCACGGCCACTATAATTTATCTATTCTTNCTATAACGGCTACATTTCTNGACCTCGTAATCTTCT
CGGGAGCTTATAGCGTATTAGGTCTATTGTTTCCGATGCTATACTTACTAGCCTGCCTCGAGGTGTTCCTCGATAGTATTTTTCGATATCCCTGGTTAAT
CATTTTAGCAGTTTCGGGATCAATGTCTGCAGTTTTAAATGTCCGAGCTGCCTCATAGTTCTCGTCTACACATCCTTGAGGTCTGTCATATGAGTGTATA
ATGCTAAGAAATGCACACCTGTTGTATGGCTTTTGTTATAGTTCAACTTCTTCTTGTGAAG
TCTACTATTGCACTAGTCTCATAATTTTCTTCTTCTGAG
CACGAATTTAATGCTGGGCTATTTGATTACTTGATTGCGATTGATGATCTTTTATCATATATATAGGAATTATTTGTTTATCTTTATGTCAGTTATGCTT
TAATTTTTAAAATCATCGAAAGATTCATCGAATGCTTATTTGGTGTATCATATGATAGACTTTATATTGTTATTCAGTATTTTGTTCTGTTTTATGGAAT
GTGTCTTCATTAGGCTCTTATCTTTTTCCTTATCATTCTTGTATACATTTTTATTAATGATACCATCTCCTTGAATTGACTTTTTATCTGTCATCTAATT
TCTATTTCTTTCCTTTTTTCTCTTGTGATTTTTCTATTTTTTACTCTCTTCTTTACTTTTATCTTTGTCTATTTCGTCTCTGTTTTTATTTTTTCTTTTT
AGCTCTTTTT
>LE_HBa0026M05_T7_136894 (trimmed for quality and cloning vector)
TCTACTATTGCACTAGTCTCATAATTTTCTTCTTCTGAGCACGAATTTAATGC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.840928
Expected error %
1.8152
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0026M05
Clone
Clone name
hba-26m5
LE_HBa0026M05
C02HBa0026M05
P026M05
Clone type
BAC
Contamination
none
Estimated length
120,876
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found