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Clone Read LE_HBa0026H05_SP6_136653

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0026H05_SP6_136653
Primer
SP6
ID from Seq. Facility
LE_HBa_026_H05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 784 raw
Sequence
>LE_HBa0026H05_SP6_136653 (raw untrimmed)
TAGCTAATATATTGGTGGAGTGCATCCCCTTTATAGGGGGGGCGATNGANGCATATTNTGTGAAGTATAGCATCGAATATAGATAACATTAACATTAGAT
GAGTATTAAATAATCGCCTTCTCATCTGCGTCCTACTACACCTCCCCACACCTATCTCTCTTGCGATGGCCGCCCCCCCTGGACAGGGATAAGCGCCACG
ATAACAATACGCTATCACGCCTGCTGATTCCTTGAAACGACTCCTCTGTCAGCCCACCTGACTCTACAGATACTCCGCTCATCCGCCGTGCACGACACGC
CTCTAACAACCATCACAATCGTTTTAT
TATATCTTACCAACTTTCTAGGTCTCTGAAATGATTTTACTAATACATATGTATATTAGTAATGAGATTTCTG
CTCTGTCTGTTTTTTGCTTTTCGCGCCTGTTTGTGCTGCCTCCTCAACTGACCAGAGGCTGGCGGCATCCTGTGATTCTGTGTACGTGTTTGCGCGCGTC
AGATCTTGGTTAATGTGGGAGTCAACATCTTATGCATATTATCATTGGTGTCGGCATGCATATGTGTGTCATATGACCTTCTTTTTTTCCTGTCTACCGT
GCTTGCTCTCTATACACTCTCATCTTCTCCTATTGTTCTATTGTCTTATCTTTTGTTTGTCTCCTGTAACCTTCGTTGTTCTTGTTTTGTCTCATGCCCG
CCTATCTATAACTCTGTTCTATAAGTTGCTTTCCTTTAAACATTGACAACGTCTCGATCATTAGTCAAAACCCTACCTCCGCCT
>LE_HBa0026H05_SP6_136653 (trimmed for quality and cloning vector)
TAT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.403
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0026H05
Clone
Clone name
hba-26h5
LE_HBa0026H05
P026H05
Clone type
BAC
Contamination
none
Estimated length
115,797
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found