Clone Read LE_HBa0170C01_T7_13635

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0170C01_T7_13635
Primer
T7
ID from Seq. Facility
LE_HBa_170_C01-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 1107 raw
Sequence
>LE_HBa0170C01_T7_13635 (raw untrimmed)
ATTAGTATATAACCTGTTCACACAGCAACACGCACAGAAGCAACCTANAGAACTGACAAACTACGCTTCGCAACGGCAGCCTGCCCTACCTGGACCGCAA
GTAACCCCCCTTTCCTTATTTCTAGGTACTTTAAGGAGTATCAGATGGTTAATCTATTTAGGGGGTTCCTTTTAAGATACATGTCAAACGAGCACTCGGT
AGACGATATTGAGCAGATGACTTAATAATCTAAAGGTGTGTAGGAGGCATAGCGCTCGGGGCACTTCGGGTGGAGGTCATAGGTGTTCTGATAGTCTTCT
ATGTTAACCTTAGAAATGTTTTCTAATATTGACATACATAAGACGACGCTTATGATATGTATAGATGAATAGAGCACACCCAACGAGCCTATCCAATGTA
ATTTGTTCACAGAGTAATAGTAACGTAGTACACTCTTCCTTCTTTGGATTCTTTTCACTTTCCTGGAGAGGGGGCTACGNAGCTCTCGAAGTTGTGATCG
GAGTAAACGAGGGATCGACAACCAGAGGAAAGACGGCGATCTCCAGGAGGGGGGTCGGTAACCGTAGATATTATTGAGATAAGAGATAAGGAAAGAAAGA
TGATAAAGAAAGATATAACTAAATTCTTTTATTTTAAAATATTATAAAGATAGTAAATCGAAACAATAATGTTTGAAGCTGACTGCGAGGTCTTCGGCCG
TCGCCATAAATATTCCCAATCCGATTATAATACATGAAACATGGCTAGGCGGAATAGTCATGAGCATAGGTGACGGTAAGTAGTGAGATCGCGGAGGGAA
GGGGGAGGTAGAAAGGGTGAGCGGAAGTGTAGATGTACGGCCGGTGTAATTGTGGTTTAGTGGCAGGGCGGATTGACATCTAGATGGGTGTACAACGATA
ATTACGTATAACCTGTAGGTACACTCATACCGTGAATACTGCATAACATCGTCTATTGAGTCGAACTTTAAGCCGAGGAGGATTCGCATGATGATGTATC
ATGTAGTGATTGTTTTCTTGTTATGTTTTCAACATTCTCACCTCACTATTTACGTCCCTCTGTTGAATCACTGCTGTCTGCGTGTCGTATGAGTTACTGT
GCCACTG
>LE_HBa0170C01_T7_13635 (trimmed for quality and cloning vector)
ATTGT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.72683
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0170C01
Clone
Clone name
hba-170c1
LE_HBa0170C01
P170C01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found