Clone Read LE_HBa0025D18_SP6_135719

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0025D18_SP6_135719
Primer
SP6
ID from Seq. Facility
LE_HBa_025_D18-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
669 trimmed for vector and quality, 967 raw
Genbank Accession
Sequence
>LE_HBa0025D18_SP6_135719 (raw untrimmed)
TTTATTATAAACTTATGGCTNCATAGATNGAGTACTATTCAAGATATCAATATTTATTACAATTTATACTAAAATTGTTATAAATGAAAAACTCCAAGGA
TGTTATGTTTTTATACTTTAGGGTTGAAAACTAAAGAGAGAATCAAATACATAAAAGAGACATTTTAATTAATAGAGCATTAGTAAAATCAACATGGGAT
ACAAGGGTGTTGCTAAATAAAGAAATATTGAAATAGATATAAGAGACACATTTCAACTAAAATAATGTCAATTAATTCAACTGGGGAGATGTTGGCCTAA
AGCCCTCACAAACAAAACAAAGAAAGTGTGTTTTCCTCAATGAAGAGAAATATCAAGACAAGATGAAGATAAAAGAACTCCATATGTAGTCACTATGTAT
AACCTTCGCTAACTTATATGGTGAATCGTAAAATAAAATTAGATCACCAATGGAGTTTTTATTTTAGAACAATACATTTTTCAATTTGGTGGACTTTACT
GTAATCGCCCAATGCAAATGGGTAAATTGACGTTCTTTCCATGGATATCACCAAAATTACCAGTATTCTTCCAATATTGCATGGCTAATGACACTGAAAA
TGAGGGGTTGATATAATGTTGTTGGACAAAAAACTAGTAGGTGATGCACATCTACAATATAAACATTTAAGCATATAAAGTTGAATCCCCCTGTTAGGCA
AACACATTGGAGCTTCACTTAATGTACATGGTGGATCTTCGAGTTGCTTTTTTACATCATTCATTCTGGGAGAAAATACTTGAAACTTTTTGACACCTGG
TTTTTGAAAATAACTAAGACTTGGTTTTTCTCCCCCAAAGGTATTTTTGGCCCCACCTGGACATGGAAAGTTTCTCAAACTCATTCCTTTCCCAATTCAA
CACCCCAATTTCGGCCTTTTCCAACAACCCCTTCCCCCGGGCTTGACTTGAAAACCCCCCCCGAATT
>LE_HBa0025D18_SP6_135719 (trimmed for quality and cloning vector)
GTACTATTCAAGATATCAATATTTATTACAATTTATACTAAAATTGTTATAAATGAAAAACTCCAAGGATGTTATGTTTTTATACTTTAGGGTTGAAAAC
TAAAGAGAGAATCAAATACATAAAAGAGACATTTTAATTAATAGAGCATTAGTAAAATCAACATGGGATACAAGGGTGTTGCTAAATAAAGAAATATTGA
AATAGATATAAGAGACACATTTCAACTAAAATAATGTCAATTAATTCAACTGGGGAGATGTTGGCCTAAAGCCCTCACAAACAAAACAAAGAAAGTGTGT
TTTCCTCAATGAAGAGAAATATCAAGACAAGATGAAGATAAAAGAACTCCATATGTAGTCACTATGTATAACCTTCGCTAACTTATATGGTGAATCGTAA
AATAAAATTAGATCACCAATGGAGTTTTTATTTTAGAACAATACATTTTTCAATTTGGTGGACTTTACTGTAATCGCCCAATGCAAATGGGTAAATTGAC
GTTCTTTCCATGGATATCACCAAAATTACCAGTATTCTTCCAATATTGCATGGCTAATGACACTGAAAATGAGGGGTTGATATAATGTTGTTGGACAAAA
AACTAGTAGGTGATGCACATCTACAATATAAACATTTAAGCATATAAAGTTGAATCCCCCTGTTAGGCA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.925773
Expected error %
0.1629
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0025D18
Clone
Clone name
hba-25d18
LE_HBa0025D18
P025D18
Clone type
BAC
Contamination
none
Estimated length
103,438
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found