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Clone Read LE_HBa0024J23_SP6_135249

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0024J23_SP6_135249
Primer
SP6
ID from Seq. Facility
LE_HBa_024_J23-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
573 trimmed for vector and quality, 938 raw
Genbank Accession
DU047176
Sequence
>LE_HBa0024J23_SP6_135249 (raw untrimmed)
GGGTTTTTTTCCATGGTCCACAAACATGTTATGACTCAAGCAAGTAAGAATAAACCCCTTTAGGGGGTTTGAAAAGCTCTCCGCGAGGTAGCTTTTCCCT
TAAATATTTTTTCCTACTTCTTACAATTTTATATGATACAAACATTATTTAGAGTCATCACCTTGTCAAATTTCCTTTTCGGAAGAACCTTTCCATAACT
TTCAATTTGATTGTTATAGAACTACCTATGAACAAAGTTTCATCGGGTTTAATAAAGGTAATAAAGTTCAAATGACTATTTACCAATATTCATGTTTATT
CAAATAGTTGTATTGAATAGACATATCTTTTTATGAAAAATCACAACATTTTAAGTGACATTTTTTCATAAAAGAACACAATTAATTTGAACAAGTGTAT
ATATAATTTGATAGTTTCATACTAGTCACAACATATATTAGTAAAAGAGAAACTTAATAACCACAATATCAAATATACTCCAAGAATTTTGTTGCTCTAA
CATAATACATAAATATCATTGAATTTCATATCATATGCTCCAATTATTTTATCTTTATCATAACCAAAGAACCCTCACATTTTAAATGTAATCTCAAAAA
TATTTTTTCAACATATTTTCTCAGACTATGAAAACGTAATTGAAAGTATGCTACCTCTTTTTAAAATATTATTCTACAAAAAATTATATTGCTTCAATTA
TTTTTGAAAATCTTACATTGCGTCAAAGTTCATTCCATAGAGGCACAAAATCACAAAATGGTAAGCACTGATATTTTTTTCCCCTTCCCAAATAGACATT
CCATATTTTAGATACCAACAATAAAGAAATTTTTTTATAAATTTATTTTTATTATCCGCGGAGTTTATCAAACTCAAAGTCTCCCTTTTACTTTTTTGGT
GAGTTTTCATAAACCAATTTGCTAGCTTAATTATCCAA
>LE_HBa0024J23_SP6_135249 (trimmed for quality and cloning vector)
TTGAAAAGCTCTCCGCGAGGTAGCTTTTCCCTTAAATATTTTTTCCTACTTCTTACAATTTTATATGATACAAACATTATTTAGAGTCATCACCTTGTCA
AATTTCCTTTTCGGAAGAACCTTTCCATAACTTTCAATTTGATTGTTATAGAACTACCTATGAACAAAGTTTCATCGGGTTTAATAAAGGTAATAAAGTT
CAAATGACTATTTACCAATATTCATGTTTATTCAAATAGTTGTATTGAATAGACATATCTTTTTATGAAAAATCACAACATTTTAAGTGACATTTTTTCA
TAAAAGAACACAATTAATTTGAACAAGTGTATATATAATTTGATAGTTTCATACTAGTCACAACATATATTAGTAAAAGAGAAACTTAATAACCACAATA
TCAAATATACTCCAAGAATTTTGTTGCTCTAACATAATACATAAATATCATTGAATTTCATATCATATGCTCCAATTATTTTATCTTTATCATAACCAAA
GAACCCTCACATTTTAAATGTAATCTCAAAAATATTTTTTCAACATATTTTCTCAGACTATGAAAACGTAATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.893196
Expected error %
0.4048
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0024J23
Clone
Clone name
hba-24j23
LE_HBa0024J23
P024J23
Clone type
BAC
Contamination
none
Estimated length
74,755
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found