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Clone Read LE_HBa0024J01_SP6_135205

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0024J01_SP6_135205
Primer
SP6
ID from Seq. Facility
LE_HBa_024_J01-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
658 trimmed for vector and quality, 943 raw
Genbank Accession
DU047132
Sequence
>LE_HBa0024J01_SP6_135205 (raw untrimmed)
TTTCTTTTTACCCTAGAAGCAATGAGAAAAATAAGTTATTACGCAAAATTTAAACACCCTTGACACAGAATCACCTTAGTCTGGTGGCAGAGTTGATTCC
TTACGAAATAACTTAGAACAGCCAAATTGTGTTTTGATGGGATGGTATTCCCTTAGATACTGATAAATTATTTTATATGTTTAATTTGTCAAAATAATAG
CTTTAAACATTCTCTCTAGAGGGAAGAATAAGGGTAAAAATACATATTACGATGAAAAAAGGAGAACGAGAAACTAAACAAATTTTGGACCATATATGAT
ATAGCCATGCTACATGGAAATTCCAATTGTAACTTGTGAGATTTTGAACTGCATGGCCTACCATTGGCACCAGATAACAAGTAAAGTATGTTACTTCCAT
ACAAACATCATTTGAAGAGCAAATCCAAGACGTCACACCTATTGCCATATAAACTTACCAAAAGATCCTACCTCTAACTTCCTACTAAGTCCACTTAAGT
TAATGAACCAGATGTGGAATCTATACCACTGCGGTGAGATTGAGAGGTAAAGTACCTGAAGATCCATCATGGCCATGTATCTTTGCAGTGGAACTTGATA
CTGGCGGAGATTGTGCATCACTTTCTTCTCCTGATATTTGATGAAAAAGGTTTAAACTTCTAATTACAAATGGATATGGAAAGAAGGGAACTCCACAATT
ATGAAATGACCTGAAATTGTTGGCTTGAAACAGTGGGAGGTAAAAGACCACGCAAATAGTGAGCATCTCTCTCCCCCTCATAAAGGCAACCCTTTGTTAA
TATGTGGATCACGTAACAAACTATATCCACTGAAATAAATACTTAAAAATGATTGCTAAAAGAATCCGATACCCACACTAATTCCCCTCATAAATTTTAA
CTCAACCATCCATACGAAAAACAGATAAACCTCTGATATCTTC
>LE_HBa0024J01_SP6_135205 (trimmed for quality and cloning vector)
AAAAATAAGTTATTACGCAAAATTTAAACACCCTTGACACAGAATCACCTTAGTCTGGTGGCAGAGTTGATTCCTTACGAAATAACTTAGAACAGCCAAA
TTGTGTTTTGATGGGATGGTATTCCCTTAGATACTGATAAATTATTTTATATGTTTAATTTGTCAAAATAATAGCTTTAAACATTCTCTCTAGAGGGAAG
AATAAGGGTAAAAATACATATTACGATGAAAAAAGGAGAACGAGAAACTAAACAAATTTTGGACCATATATGATATAGCCATGCTACATGGAAATTCCAA
TTGTAACTTGTGAGATTTTGAACTGCATGGCCTACCATTGGCACCAGATAACAAGTAAAGTATGTTACTTCCATACAAACATCATTTGAAGAGCAAATCC
AAGACGTCACACCTATTGCCATATAAACTTACCAAAAGATCCTACCTCTAACTTCCTACTAAGTCCACTTAAGTTAATGAACCAGATGTGGAATCTATAC
CACTGCGGTGAGATTGAGAGGTAAAGTACCTGAAGATCCATCATGGCCATGTATCTTTGCAGTGGAACTTGATACTGGCGGAGATTGTGCATCACTTTCT
TCTCCTGATATTTGATGAAAAAGGTTTAAACTTCTAATTACAAATGGATATGGAAAGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.952782
Expected error %
0.2646
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0024J01
Clone
Clone name
hba-24j1
LE_HBa0024J01
C08HBa0024J01
P024J01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found