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Clone Read LE_HBa0024I16_SP6_135187

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0024I16_SP6_135187
Primer
SP6
ID from Seq. Facility
LE_HBa_024_I16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
668 trimmed for vector and quality, 991 raw
Genbank Accession
Sequence
>LE_HBa0024I16_SP6_135187 (raw untrimmed)
TTTTAATTTAACGTTGAAATAAAATAATTTATTGGACATGATAATATTCGCCTTTCCTTATCAACTCTCCAGCGGATAAGATTGTTCCTCCCCTTTTCAT
GGGTTTCGAGTTCAAATCCTGAATGTGAGAAAATTCTTGACAAAGAATATACCCCCTAAATAAGGCTCTACATAACGTGAATCTAAAATAATAGACTCCG
ATAAAATCAAGAAATCTAGTCTAGTACACGTCATATGGTATTTGGTTTGCAAAAAGTATACGATCAACTTGTAGAAAAATATAAGTACAATAAGTCCCAC
AAATCTGCTAAGTTCCTGCTATTTAAATGATGATGGTGTGAGGACACCGAACAACTTGTCCACACAAATACAACGAGTTGTCAACGACTATTGCAATGAT
GTTGTTTTCAAGTGGTGATAAACTAAATTAAATTTTATGAGTTATAAATTTTAAAATAATGATTGGGAAGTGTTTATATTTAAATTTTAAATTTGATAAA
TATATATATATTTAATAATTTTTTTAATATAAATAAAATATTTAAAAAATTGATAAATCATCATAAAAAATATTTTCGATTTGTGTTGTCCAAGTCTCAA
AAGGTGTGTATGATCAAACAACTAACGTCATGCTAAGTCAAATATTGCAATTACCTCTCCTCTTGTCTTTACTTCACCAAGTTAGTGTTTACACTGTTGT
AAGTGTTGGGTTATGGGCTTTTTTCCCTTTCTATGTGGATAAATAAAGGGAAAATTTCATATATGGCAAACTTATTAGATTAAATAACATTATATGGGTA
TAGTTTACCTAATTAGATAATATGGAGTAAGTTTAAGTATTAAGGGTGTCTTTAATTTTGTATTTAATTTTTTTATTATTATTAAACAATTCATTTTAAA
AGTTGTTTGAACTGAACATTAAATTGGGAACAAAAATCAGAAAATGGCCCGTTTTAGGAAAAGTCCCCATTTTAAACCCAAATTTCATTCA
>LE_HBa0024I16_SP6_135187 (trimmed for quality and cloning vector)
AACTCTCCAGCGGATAAGATTGTTCCTCCCCTTTTCATGGGTTTCGAGTTCAAATCCTGAATGTGAGAAAATTCTTGACAAAGAATATACCCCCTAAATA
AGGCTCTACATAACGTGAATCTAAAATAATAGACTCCGATAAAATCAAGAAATCTAGTCTAGTACACGTCATATGGTATTTGGTTTGCAAAAAGTATACG
ATCAACTTGTAGAAAAATATAAGTACAATAAGTCCCACAAATCTGCTAAGTTCCTGCTATTTAAATGATGATGGTGTGAGGACACCGAACAACTTGTCCA
CACAAATACAACGAGTTGTCAACGACTATTGCAATGATGTTGTTTTCAAGTGGTGATAAACTAAATTAAATTTTATGAGTTATAAATTTTAAAATAATGA
TTGGGAAGTGTTTATATTTAAATTTTAAATTTGATAAATATATATATATTTAATAATTTTTTTAATATAAATAAAATATTTAAAAAATTGATAAATCATC
ATAAAAAATATTTTCGATTTGTGTTGTCCAAGTCTCAAAAGGTGTGTATGATCAAACAACTAACGTCATGCTAAGTCAAATATTGCAATTACCTCTCCTC
TTGTCTTTACTTCACCAAGTTAGTGTTTACACTGTTGTAAGTGTTGGGTTATGGGCTTTTTTCCCTTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.935842
Expected error %
0.2287
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0024I16
Clone
Clone name
hba-24i16
LE_HBa0024I16
P024I16
Clone type
BAC
Contamination
none
Estimated length
121,859
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found