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Clone Read LE_HBa0023K06_SP6_134495

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0023K06_SP6_134495
Primer
SP6
ID from Seq. Facility
LE_HBa_023_K06-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
674 trimmed for vector and quality, 875 raw
Genbank Accession
DU044499
Sequence
>LE_HBa0023K06_SP6_134495 (raw untrimmed)
GGGAAATACTTAAACGCCCCATTATATTNCATTACAAGCATTCCGCTGAAGCTGCATCTCACACATTCAAAAGTGTTTTTTTGGTTAGCTTCAATGTATA
AAAAGGAATAAACTGAAAAAACCAAGCAGAACTACAGCAGTTGATACAAAAGCCAAGGAAACAGCTCTTGAATTTTCAATTAAAGAAGATTGCTATAATA
TATCTGATTATGCCCCACAGAATTTGAATTATAACGCTGAAAATTCAATTTAAAGTTCAACATTTTATGGTGATTCAACTTAAAAGACATAATGATGGCC
GTGTAGTTCTTTTTCTTGCATAATCAATGTAATGCTAGTTGAAAAAGAGCTTTTGACCAACTTTTGATGGGTCCAGTGACTTTTTAAATTGAACTTAAAT
GAACCAGTTCATATAGTTCCTAAAGTTGAAATAGTTGACAAGGCTGCTATACATAGTTCTGATAAATTAACAATGATCAGAAAGTCAACCAAGGAAACAT
AAAGTTGATATATCTGACTGTACAGTAGAGTGTAATGCTAAGATTTAACCGCAAACTTCTAGACAAAGAAACCCAACAAAAATGACAAGAGTTATTAATT
GAACAAGTTCCATCATTGATTAACAAAGAGAAAGAAGATTAATAATTACAAAAAGGATGGCTCAGTTTTCACCCCAAGTTACTCACAACTAGAGCAATAA
TAAACAAAAAAAATTCAAATGGAATTTAAAGCCACTTACATATATGCCTGTCCGCAGGCACACTGGGAATTCTAAAAAATGGACCACAAGGAAAGAAAAG
GGTTTTTATACCTGGATAGATAAATCCGGGATTTACTAGGAATTTCTTTGAATTTGCCCCCTAATATGGAGGATT
>LE_HBa0023K06_SP6_134495 (trimmed for quality and cloning vector)
TTACAAGCATTCCGCTGAAGCTGCATCTCACACATTCAAAAGTGTTTTTTTGGTTAGCTTCAATGTATAAAAAGGAATAAACTGAAAAAACCAAGCAGAA
CTACAGCAGTTGATACAAAAGCCAAGGAAACAGCTCTTGAATTTTCAATTAAAGAAGATTGCTATAATATATCTGATTATGCCCCACAGAATTTGAATTA
TAACGCTGAAAATTCAATTTAAAGTTCAACATTTTATGGTGATTCAACTTAAAAGACATAATGATGGCCGTGTAGTTCTTTTTCTTGCATAATCAATGTA
ATGCTAGTTGAAAAAGAGCTTTTGACCAACTTTTGATGGGTCCAGTGACTTTTTAAATTGAACTTAAATGAACCAGTTCATATAGTTCCTAAAGTTGAAA
TAGTTGACAAGGCTGCTATACATAGTTCTGATAAATTAACAATGATCAGAAAGTCAACCAAGGAAACATAAAGTTGATATATCTGACTGTACAGTAGAGT
GTAATGCTAAGATTTAACCGCAAACTTCTAGACAAAGAAACCCAACAAAAATGACAAGAGTTATTAATTGAACAAGTTCCATCATTGATTAACAAAGAGA
AAGAAGATTAATAATTACAAAAAGGATGGCTCAGTTTTCACCCCAAGTTACTCACAACTAGAGCAATAATAAAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.927585
Expected error %
0.224
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0023K06
Clone
Clone name
hba-23k6
LE_HBa0023K06
C02HBa0023K06
P023K06
Clone type
BAC
Contamination
none
Estimated length
79,042
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found