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Clone Read LE_HBa0022N17_T7_133894

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0022N17_T7_133894
Primer
T7
ID from Seq. Facility
LE_HBa_022_N17-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
701 trimmed for vector and quality, 944 raw
Genbank Accession
DU041503
Sequence
>LE_HBa0022N17_T7_133894 (raw untrimmed)
GGTGAGAGGGGCCCGGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTGTAATGATTTATTTCTAAAGGAATCAACCAGTGGATAAGTTGGAAC
CCTTTGGCTAAAGAATTTATTGAAAGCTTTGGTTATAAGAATTCATTCCCAATCTATACTCTTTGGAGAGAATCGAACAAAATTCTACTGAAATTTATCG
AGAGTATGTCTGCCTTTGGAGAAGAGAGGTTGCACGAGTTAGTCCTCCCATGACTGAGAGAGAGATTATTGAAGTCTTAGTCACATTCAAGAGCTGGAGT
ATTATAATAAAATATTACTCATTCTAGGAGGAAAGTTCACTGAAATAGTTAAAATTGGAGAAACTATTGAAGATAGACTCAGGACTAGAAAAATCATCTG
AATGACTCCCTAAGATGAATCCCTAGGACCATTAAGAAGGAAAAGGAAATATGTTTCCTCTATCTCATTTGAATCGAGCCAAAAATCAAAGAGATATGCT
GATCTTAATGTCCGAAAGCATTTACCATTTAAAACCTACCTTATAGCTCCACAAAACCCTTACCCCATCCAACCAAATTATCGAGAATCCACCTTGTTAC
AATTGGAATATTATCGAGCATCCACCTCATTACAGATGGAATATTATCAAGCGTCCACCTCGTTACAGTTGGACTATTATCAAACCATCAACCTCGTCAC
AGTTGGAATATTATCGAGTTATCCACCTCGTTTACATTGGACTTATTATCGAGTCCATCCACTCATTTCCAGTTGAACTCCATTGAGTTACCACCTTGTT
ACAGACGGGATATTTTCGAGCATTTCCCCGTTCTCTTGGGAAATCTTCAAGTCTCTACCTTTTACCGTTGGATAACATCCAGCCTCCACCCTTGTTATAT
TCGAACTTTCTCTCCCCTCCCCCCTTAGGTTGGAAATATCCCTC
>LE_HBa0022N17_T7_133894 (trimmed for quality and cloning vector)
AGCTTTGTAATGATTTATTTCTAAAGGAATCAACCAGTGGATAAGTTGGAACCCTTTGGCTAAAGAATTTATTGAAAGCTTTGGTTATAAGAATTCATTC
CCAATCTATACTCTTTGGAGAGAATCGAACAAAATTCTACTGAAATTTATCGAGAGTATGTCTGCCTTTGGAGAAGAGAGGTTGCACGAGTTAGTCCTCC
CATGACTGAGAGAGAGATTATTGAAGTCTTAGTCACATTCAAGAGCTGGAGTATTATAATAAAATATTACTCATTCTAGGAGGAAAGTTCACTGAAATAG
TTAAAATTGGAGAAACTATTGAAGATAGACTCAGGACTAGAAAAATCATCTGAATGACTCCCTAAGATGAATCCCTAGGACCATTAAGAAGGAAAAGGAA
ATATGTTTCCTCTATCTCATTTGAATCGAGCCAAAAATCAAAGAGATATGCTGATCTTAATGTCCGAAAGCATTTACCATTTAAAACCTACCTTATAGCT
CCACAAAACCCTTACCCCATCCAACCAAATTATCGAGAATCCACCTTGTTACAATTGGAATATTATCGAGCATCCACCTCATTACAGATGGAATATTATC
AAGCGTCCACCTCGTTACAGTTGGACTATTATCAAACCATCAACCTCGTCACAGTTGGAATATTATCGAGTTATCCACCTCGTTTACATTGGACTTATTA
T

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.946768
Expected error %
0.6321
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAU89777.1| Score 69 E Value 6e-17 Identity 51.70% Align. Length 355bp (50.64%) Frame 2
gag-pol polyprotein-like [Solanum tuberosum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0022N17
Clone
Clone name
hba-22n17
LE_HBa0022N17
P022N17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found