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Clone Read LE_HBa0017H05_SP6_130509

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0017H05_SP6_130509
Primer
SP6
ID from Seq. Facility
LE_HBa_017_H05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
499 trimmed for vector and quality, 891 raw
Genbank Accession
DU049722
Sequence
>LE_HBa0017H05_SP6_130509 (raw untrimmed)
TTAATTTTAATTAACATTTGCCTACTTACACTAGTGCCATAGTGATAGACGCCAGTTAACGTATGTATCTACAACGTTGGACCCCTTTTTGAAGAGAATC
TCCGGGTAGAAAATTATCATGATATGCGCTTGCCTTAGAAAGCTTTTATACAGATCTGATTTTCAATATGGGCACCTGTTTTTTGGTAAAATTGGATGAT
TAATGATCAGATATTCTGATATAGTTTTTTAGATGATGCATTACTAGTTGAACAATACCCCACAACTTGGCTAGCATACACCTGTTTTGCCTCTCGTTAT
CATGAGACAGAGAACTGAGTCTGTTTAATTTACAGGATAAGAGTTTGTCAGATGGCATCTTTTTCCTTGAGCTGCTTAGTGCTGTACACCCTCGAGCTGT
TAACTGGAGCCTTGTTACAAAAGGAGAAACTGGTAATCTTATTTCAGACTTCAAATAGGCTCTTTCAGTTGTTCTGATTTTATATTAGTTGCTTGTTGGT
ATCAACACGAGGCATTGTTTCTCCATTCAGTCATGATTGTCAGTACATTAGACTTCTTAGTAATTCAAAATTTTATTTTGGTTGATGCAGAGGAGCAAAA
GAAGATGAACGCAACCTACATTATCAGTATTGCAAGGAAACTTGGATGTTCATATTTTATTACCCGAAGATCTGATGAGGTAATCATCTTTGCTCACATG
CATGATGTTNATGCTTCTACTGCAGGACACTAATACCTGCTGNATGCTTTAGCTCAGCATTGATTCCTGCTCTATATAAACAATAAATCCTGCNGCTATT
CACAAGGCATCACATGCTATATCCAAGTATAATATCTCTGATATACGAATATCGAGAACATAAACTTGGATACATCGACAATGGCTATGAC
>LE_HBa0017H05_SP6_130509 (trimmed for quality and cloning vector)
TTATACAGATCTGATTTTCAATATGGGCACCTGTTTTTTGGTAAAATTGGATGATTAATGATCAGATATTCTGATATAGTTTTTTAGATGATGCATTACT
AGTTGAACAATACCCCACAACTTGGCTAGCATACACCTGTTTTGCCTCTCGTTATCATGAGACAGAGAACTGAGTCTGTTTAATTTACAGGATAAGAGTT
TGTCAGATGGCATCTTTTTCCTTGAGCTGCTTAGTGCTGTACACCCTCGAGCTGTTAACTGGAGCCTTGTTACAAAAGGAGAAACTGGTAATCTTATTTC
AGACTTCAAATAGGCTCTTTCAGTTGTTCTGATTTTATATTAGTTGCTTGTTGGTATCAACACGAGGCATTGTTTCTCCATTCAGTCATGATTGTCAGTA
CATTAGACTTCTTAGTAATTCAAAATTTTATTTTGGTTGATGCAGAGGAGCAAAAGAAGATGAACGCAACCTACATTATCAGTATTGCAAGGAAACTTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.953321
Expected error %
0.5398
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0017H05
Clone
Clone name
hba-17h5
LE_HBa0017H05
P017H05
Clone type
BAC
Contamination
none
Estimated length
93,074
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found