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Clone Read LE_HBa0017E11_SP6_130377

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0017E11_SP6_130377
Primer
SP6
ID from Seq. Facility
LE_HBa_017_E11-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
648 trimmed for vector and quality, 949 raw
Genbank Accession
DU049619
Sequence
>LE_HBa0017E11_SP6_130377 (raw untrimmed)
GAATAATTTCTCCATAACATAAGGTATAGGTAATATAACCAATCATAATCCCCATAGAGTTAACATATAAAATGATAAAGTAAATCCCCATAACCCTACT
ACAATCAAGTAACCCAATAGGAACTATAATTAGCACCATATTCCACTTATCTATAACCTTCATGCATGCATAACTCCATATCTTCAGCACACTAGGCTTT
TTATATGTTTATAAGCATAGGGATCGTCACATAAGGACATTAACATTCACCATAATACACATACATTCTATTAATCTCCTAAGGTCTCCATGAAGCCAAA
CTAGTGAAAGACATAGATAGAGTCCCATACCCCTACCTAAGTCTAGTTAAACCTTCAAATCTCCTTAGTTAGTTTATACATCATCATATAAGGACAAATG
TCACCTTCACACATAATCATTAAAACCATAAAACAAGTATAAGCATTTAAACTCACCTTTTCTCCCTCAAGCGTAGAGCAAGCTCATCCAAGGAATAACA
TCTAAAAGGCCACCGGACAAGAAAACATAAGAGAGAGATCTTACAGAGTTATGTTCTATGGCACGACATGAGAATGATGAAGAAGGGAAACTTTATCGTC
TTATATCCTCTCATACCATTTGATGTGTCACGACTCACCACCAATGATACAAGACTCTACTAGACGTAGCAATATGAGACTTCTTGGACCCTAAACCACT
TATAAAAAGCTCGTGATCTAATACCACGTTTGTCACATCGAGAGAGACCCCCTAAAGTAACCTTGGTAATTGACCTCTCAATGTCTAATACAACCCCATA
GGTTATCATTCTCGCATCACATTATAATTTTACAAAAAATTAAAATTTTTCTAACCCCCAATTGGATGAACTTCCCCAAAATAATAAAACAAAAAGTCAT
ATACTGTATTACCCTAATTGCTTTTCATAAATACCTCACAAATCAAATA
>LE_HBa0017E11_SP6_130377 (trimmed for quality and cloning vector)
ATATAACCAATCATAATCCCCATAGAGTTAACATATAAAATGATAAAGTAAATCCCCATAACCCTACTACAATCAAGTAACCCAATAGGAACTATAATTA
GCACCATATTCCACTTATCTATAACCTTCATGCATGCATAACTCCATATCTTCAGCACACTAGGCTTTTTATATGTTTATAAGCATAGGGATCGTCACAT
AAGGACATTAACATTCACCATAATACACATACATTCTATTAATCTCCTAAGGTCTCCATGAAGCCAAACTAGTGAAAGACATAGATAGAGTCCCATACCC
CTACCTAAGTCTAGTTAAACCTTCAAATCTCCTTAGTTAGTTTATACATCATCATATAAGGACAAATGTCACCTTCACACATAATCATTAAAACCATAAA
ACAAGTATAAGCATTTAAACTCACCTTTTCTCCCTCAAGCGTAGAGCAAGCTCATCCAAGGAATAACATCTAAAAGGCCACCGGACAAGAAAACATAAGA
GAGAGATCTTACAGAGTTATGTTCTATGGCACGACATGAGAATGATGAAGAAGGGAAACTTTATCGTCTTATATCCTCTCATACCATTTGATGTGTCACG
ACTCACCACCAATGATACAAGACTCTACTAGACGTAGCAATATGAGAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.940361
Expected error %
0.4364
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0017E11
Clone
Clone name
hba-17e11
LE_HBa0017E11
P017E11
Clone type
BAC
Contamination
none
Estimated length
132,459
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found