Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0017C24_SP6_130307

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0017C24_SP6_130307
Primer
SP6
ID from Seq. Facility
LE_HBa_017_C24-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
688 trimmed for vector and quality, 888 raw
Genbank Accession
DU049563
Sequence
>LE_HBa0017C24_SP6_130307 (raw untrimmed)
ATCTTCCCATTTTTCAGCAGTTATATTTGTTGATCTATAAGAATTGAAGTGGGTCAAGCCCTCGACAGTTTTTTGGCCTCAAAAGTTATTGTTGCGGTCA
AGCAGAAAATATACCATGTGAGCTCAATTGACCAAAGTCGGCCAATTTTTTGGACACTTTCAAGAATTGGTATCCATGTGGCGTGGGAATCTCTGTTTTC
TTGTTTTTTTGATTAAAAAGGCTGCATGAAGAGAGAGCACTATGGGGGAAAAAAGAAAACAACAAGTGAACTAATTAAAGAGGGTTGGTTGAGATTATAT
TTTAGCAGGTTTTGTAAATAAATAATATTTCAAGTGTAGACAAGTTTTAGCGGCATGAGGCTTCGATCATTTTTATTTGTCAAGTAATGCCCTTACTGAT
GTTGACAATCTCAAGAGTTTTTATGTGCATAACTTGACATTATTTTTTGGAGGGCCTAAATTGACCACTGTAATTTTAGTAATAGTAATAACCTTTTATC
TTTATATAATTGAGGGACACACCATAAGCAGTTGAATGGAGAAACCCTTGAAGTCTGAATGCGCATATGTTAATAGTGTAATATACCACCGGATATTTTA
CACTTCAACGTGTTATTTAACTTGATAATATGGTATTTTTGTGTTCCAATTATGAGTCTGTGCAAGTAAATACTTGAATTTATATAAAGTTGAACAACTA
GGATATATACATCCTTATATTACTAATAACCACTACATATATATCTATTTTTATCAAGTTTCCTTAATTTAAAACATTATTTGTGTAATTTAAAAATTTA
AAGAAAGTGTCTGGTTCATGGAATGAAAAACAAATGTAAGAGTGCGCCCCATGTGGAAAGCTGAATGCTTTTTTGGCCTATTAGACAT
>LE_HBa0017C24_SP6_130307 (trimmed for quality and cloning vector)
TCTATAAGAATTGAAGTGGGTCAAGCCCTCGACAGTTTTTTGGCCTCAAAAGTTATTGTTGCGGTCAAGCAGAAAATATACCATGTGAGCTCAATTGACC
AAAGTCGGCCAATTTTTTGGACACTTTCAAGAATTGGTATCCATGTGGCGTGGGAATCTCTGTTTTCTTGTTTTTTTGATTAAAAAGGCTGCATGAAGAG
AGAGCACTATGGGGGAAAAAAGAAAACAACAAGTGAACTAATTAAAGAGGGTTGGTTGAGATTATATTTTAGCAGGTTTTGTAAATAAATAATATTTCAA
GTGTAGACAAGTTTTAGCGGCATGAGGCTTCGATCATTTTTATTTGTCAAGTAATGCCCTTACTGATGTTGACAATCTCAAGAGTTTTTATGTGCATAAC
TTGACATTATTTTTTGGAGGGCCTAAATTGACCACTGTAATTTTAGTAATAGTAATAACCTTTTATCTTTATATAATTGAGGGACACACCATAAGCAGTT
GAATGGAGAAACCCTTGAAGTCTGAATGCGCATATGTTAATAGTGTAATATACCACCGGATATTTTACACTTCAACGTGTTATTTAACTTGATAATATGG
TATTTTTGTGTTCCAATTATGAGTCTGTGCAAGTAAATACTTGAATTTATATAAAGTTGAACAACTAGGATATATACATCCTTATATT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.947118
Expected error %
0.2541
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0017C24
Clone
Clone name
hba-17c24
LE_HBa0017C24
P017C24
Clone type
BAC
Contamination
none
Estimated length
107,634
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found