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Clone Read LE_HBa0001M12_T7_127655

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0001M12_T7_127655
Primer
T7
ID from Seq. Facility
Le-HBa001_M12-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1728 raw
Sequence
>LE_HBa0001M12_T7_127655 (raw untrimmed)
AGACCAAACGAGCGCCGGGGGGAGTTTCCCAGAGAGTGAGACCGCGGAGAGCAGTGCAGAGCTTTCTAACGAATTAGATAAGCTTCTTTATTCCTTTCCC
CTCTTTATAGAAGAGAGCACCATCTCTCCCTCCGCCCCCCCTTCCCCTCCCTCTCTTTAAAAGGATAGACGCGGATATCTTATCAAAAATGAATATATAT
TAAAGATGTAAACTAGGACGATATAAATAAACGTCATGAGATTTTATTCTATAAGAGGCTATGAAATGTACTGAATAAATTGGATCGACCGATAGAATAG
AAGCGCTAATAAAATATTATCTTACAGATATTATACTGTATAGTTACACGTTACAAAACGAAATTAAATTGAATAGAATAGGAATATAGATATGTGGGTG
TACGGAAAATTAGGTTTTATCGTTATTCTAATAGACATCAAAGTAAACGTGGTGCATATGGACTAAGATAGTAAAGTAGAGATTGTACGATTCATTCTTA
ACACTGACTACGTTAGCGAGTGACGAAGAAATAGATGCCTTTTATACAGGAGTGGAGAGAGCGGGATGTATCGGCTTTATAGTCTTATGTATATGTGAGC
CCTCCTAATACTCAGAATTGAAAGTGAGGAAGATTAAAGTCTATCTTAAATCACATAATTTTTTACACAAGGAGTATAAAATTCATGTATACGTTATGGC
GATAGAATTATCAATCACTAATATTATAGTCTATTCTATTATTATATTAACTACACGGAATCGGGCTATAATTTCAGAGTAGAAATGAAAGGCGTCTAGG
GGTCGCTAAAATATTAATAAAGTAGGAGAGTACCGCGAAGTTAGCGGAAAATACGCTAACAGATTCTTCCTTCAGATCTCATATCTCCCAAAACGTATTG
GCTCTTCCGTCCTCTATATATGATTGTTTCTATCTTGGGACGCACAACACATCTCTGATCTATATCGCACTCCGCACTACTTACGGACTATTTACCCACA
AAACCCGCGCAGCTCTTGCTTCTTATTGAACTTTACCATCCTCCTTCTATGTTGAGCGAATCTCCAACCTACCCCTACCAACCAACTTCGGCCTCTCTTT
TTCTACCTCTAAAACACATTTATTCTACATTCACCGCAACCACAACTACACTCCAGCTGCAATTACATCTCACCTACCTCACTGCGCCTCATTCTTTACG
TCTGTTAGACTTTCATATACCCCTCTATCCATCCAGTTTCACCATTTTTATTCTCCCTTCATTAACACCCCTCTCTTACAACCCCTCCCCCACCCCAGTG
CAACCCTCCCCCCCCTCCCTCCTCTCATCTTCTTCCTCGCCGCTCTCTCGTCACACTTACCCCTCTTCTCTCATTAATACTTATCCTATTTTTTCGACAC
TTTCTCACTCCGGCTTTCTATCTTCACCCTTCCCAATCATTCACCACCCTGTTCCAACACCCTCCACCACAATATCAACATCACTACACTCCTTTCCCAT
CTCCCTCTTACTCCTCCTACCGTCTCTCCTCCTTCTCCTCCTCCTCTTCTTTCCATCAAGGGGGGGAGGGGGGGGGGGGGGGGGGGAGGGGGGGGAGAGG
ACGGAGAGAAGAACTATACAATGCGTCTCTCCCGCCACTTTCTCCTACCTCTTTCTCCCCCCCCCACTTCTCCCCCTCTTCTCTCTCTACTTCTTTTTCT
TCTTCCTTACTCTTTTTCTCTACTACAN
>LE_HBa0001M12_T7_127655 (trimmed for quality and cloning vector)
TTTT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.7819
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0001M12
Clone
Clone name
hba-1m12
LE_HBa0001M12
C01HBa0001M12
P001M12
Clone type
BAC
Contamination
none
Estimated length
140,000
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
3 sequencing reads found